PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
GtomD01G0009790.1 Rosmarinic Acid C4H low borderline
GtomD01G0009800.1 Rosmarinic Acid C4H low borderline
GtomD01G0009810.1 Rosmarinic Acid C4H low borderline
GtomD01G0009820.1 Rosmarinic Acid C4H low borderline
GtomD01G0013730.1 Rosmarinic Acid C4H low borderline
GtomD01G0013840.1 Rosmarinic Acid C4H low borderline
GtomD01G0019400.1 Rosmarinic Acid C4H low borderline
GtomD01G0023990.1 Rosmarinic Acid C4H medium pass
GtomD01G0024000.1 Rosmarinic Acid C4H medium pass
GtomD01G0024020.1 Rosmarinic Acid C4H low borderline
GtomD01G0024250.1 Rosmarinic Acid C4H medium pass
GtomD02G0000600.1 Rosmarinic Acid C4H medium pass
GtomD02G0003380.1 Rosmarinic Acid C4H low borderline
GtomD02G0003400.1 Rosmarinic Acid C4H low borderline
GtomD02G0003410.1 Rosmarinic Acid C4H low borderline
GtomD02G0003440.1 Rosmarinic Acid C4H low borderline
GtomD02G0003450.1 Rosmarinic Acid C4H low borderline
GtomD02G0003460.1 Rosmarinic Acid C4H low borderline
GtomD02G0003490.1 Rosmarinic Acid C4H low borderline
GtomD02G0003500.1 Rosmarinic Acid C4H low borderline
GtomD02G0003510.1 Rosmarinic Acid C4H low borderline
GtomD02G0003530.1 Rosmarinic Acid C4H low borderline
GtomD02G0003550.1 Rosmarinic Acid C4H low borderline
GtomD02G0003560.1 Rosmarinic Acid C4H low borderline
GtomD02G0003570.1 Rosmarinic Acid C4H low borderline
GtomD02G0003580.1 Rosmarinic Acid C4H low borderline
GtomD02G0003580.2 Rosmarinic Acid C4H low borderline
GtomD02G0003590.1 Rosmarinic Acid C4H low borderline
GtomD02G0003600.1 Rosmarinic Acid C4H low borderline
GtomD02G0003600.2 Rosmarinic Acid C4H low borderline
GtomD02G0003600.3 Rosmarinic Acid C4H low borderline
GtomD02G0003600.4 Rosmarinic Acid C4H low borderline
GtomD02G0003600.5 Rosmarinic Acid C4H low borderline
GtomD02G0003600.6 Rosmarinic Acid C4H low borderline
GtomD02G0003610.1 Rosmarinic Acid C4H low borderline
GtomD02G0003620.1 Rosmarinic Acid C4H low borderline
GtomD02G0003620.2 Rosmarinic Acid C4H low borderline
GtomD02G0003630.1 Rosmarinic Acid C4H low borderline
GtomD02G0003640.1 Rosmarinic Acid C4H low borderline
GtomD02G0003650.1 Rosmarinic Acid C4H low borderline
GtomD02G0003660.1 Rosmarinic Acid C4H low borderline
GtomD02G0003670.1 Rosmarinic Acid C4H low borderline
GtomD02G0003680.1 Rosmarinic Acid C4H low borderline
GtomD02G0003690.1 Rosmarinic Acid C4H low borderline
GtomD02G0003700.1 Rosmarinic Acid C4H low borderline
GtomD02G0003710.1 Rosmarinic Acid C4H low borderline
GtomD02G0003710.2 Rosmarinic Acid C4H low borderline
GtomD02G0003710.3 Rosmarinic Acid C4H low borderline
GtomD02G0003720.1 Rosmarinic Acid C4H low borderline
GtomD02G0004370.1 Rosmarinic Acid C4H low borderline