PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
GtomA07G0024610.1 Alkaloid CODM/T6ODM medium borderline
GtomA07G0024610.2 Alkaloid CODM/T6ODM medium borderline
GtomA08G0000680.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0006160.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0012780.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0019660.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0019660.2 Alkaloid CODM/T6ODM medium borderline
GtomA08G0019660.3 Alkaloid CODM/T6ODM medium borderline
GtomA08G0020740.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0026330.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0026340.1 Alkaloid CODM/T6ODM medium borderline
GtomA08G0026350.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0004660.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0007330.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0007340.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0010800.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0013190.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0017070.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0020770.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0020770.2 Alkaloid CODM/T6ODM medium borderline
GtomA09G0026280.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0026290.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0026300.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0026310.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0026330.1 Alkaloid CODM/T6ODM medium borderline
GtomA09G0028010.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0001730.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0003780.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0003790.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0004730.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0004730.2 Alkaloid CODM/T6ODM medium borderline
GtomA10G0008980.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0010620.1 Alkaloid CODM/T6ODM medium borderline
GtomA10G0010620.2 Alkaloid CODM/T6ODM medium borderline
GtomA10G0028880.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0009500.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0014550.1 Alkaloid CODM/T6ODM low borderline
GtomA11G0014750.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0017370.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0027440.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0027470.1 Alkaloid CODM/T6ODM medium borderline
GtomA11G0034030.1 Alkaloid CODM/T6ODM medium borderline
GtomA12G0011340.1 Alkaloid CODM/T6ODM medium borderline
GtomA12G0025560.1 Alkaloid CODM/T6ODM medium borderline
GtomA13G0002910.1 Alkaloid CODM/T6ODM medium borderline
GtomA13G0002910.2 Alkaloid CODM/T6ODM medium borderline
GtomA13G0005780.1 Alkaloid CODM/T6ODM medium borderline
GtomA13G0008050.1 Alkaloid CODM/T6ODM medium borderline
GtomA13G0012710.1 Alkaloid CODM/T6ODM medium borderline
GtomA13G0018270.1 Alkaloid CODM/T6ODM medium borderline