PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP90D1
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Gene Pathway Family Confidence Status
GtomD05G0021770.1 Steroid CYP90D1 low borderline
GtomD05G0038650.1 Steroid CYP90D1 low borderline
GtomD05G0038670.1 Steroid CYP90D1 low borderline
GtomD06G0001770.1 Steroid CYP90D1 low borderline
GtomD06G0001800.1 Steroid CYP90D1 low borderline
GtomD06G0001820.1 Steroid CYP90D1 low borderline
GtomD06G0021530.1 Steroid CYP90D1 medium borderline
GtomD07G0006600.1 Steroid CYP90D1 low borderline
GtomD07G0010810.1 Steroid CYP90D1 low borderline
GtomD07G0010820.1 Steroid CYP90D1 low borderline
GtomD07G0022730.1 Steroid CYP90D1 low borderline
GtomD08G0022090.1 Steroid CYP90D1 low borderline
GtomD08G0022110.1 Steroid CYP90D1 low borderline
GtomD08G0022120.1 Steroid CYP90D1 low borderline
GtomD08G0022120.2 Steroid CYP90D1 low borderline
GtomD09G0014660.1 Steroid CYP90D1 low borderline
GtomD09G0014690.1 Steroid CYP90D1 low borderline
GtomD10G0001580.1 Steroid CYP90D1 medium borderline
GtomD10G0006350.1 Steroid CYP90D1 low borderline
GtomD10G0031280.1 Steroid CYP90D1 medium borderline
GtomD11G0015330.1 Steroid CYP90D1 low borderline
GtomD11G0017540.1 Steroid CYP90D1 low borderline
GtomD11G0021120.1 Steroid CYP90D1 medium borderline
GtomD11G0021120.2 Steroid CYP90D1 medium borderline
GtomD12G0004680.1 Steroid CYP90D1 low borderline
GtomD12G0012010.1 Steroid CYP90D1 low borderline
GtomD12G0012010.2 Steroid CYP90D1 low borderline
GtomD12G0030470.1 Steroid CYP90D1 medium borderline
GtomD13G0004160.1 Steroid CYP90D1 low borderline
GtomD13G0004170.1 Steroid CYP90D1 low borderline
GtomD13G0004180.1 Steroid CYP90D1 low borderline
GtomD13G0004190.1 Steroid CYP90D1 low borderline
GtomD13G0004200.1 Steroid CYP90D1 low borderline
GtomD13G0004210.1 Steroid CYP90D1 low borderline
GtomD13G0007400.2 Steroid CYP90D1 low borderline
GtomD13G0010150.1 Steroid CYP90D1 low borderline
GtomD13G0010180.1 Steroid CYP90D1 low borderline
GtomD13G0010610.1 Steroid CYP90D1 low borderline
GtomD13G0014950.1 Steroid CYP90D1 medium borderline
GtomD13G0016610.1 Steroid CYP90D1 low borderline
GtomD13G0019490.1 Steroid CYP90D1 medium borderline
GtomD13G0019560.1 Steroid CYP90D1 low borderline
GtomD13G0019570.1 Steroid CYP90D1 low borderline
Gtomscaffold_2600001230.1 Steroid CYP90D1 low borderline