PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
GtomA05G0014230.1 Flavonoid F3H low borderline
GtomA05G0014230.2 Flavonoid F3H low borderline
GtomA05G0014230.3 Flavonoid F3H low borderline
GtomA05G0018250.1 Flavonoid F3H medium borderline
GtomA05G0018250.2 Flavonoid F3H medium borderline
GtomA05G0018870.1 Flavonoid F3H medium borderline
GtomA05G0024070.1 Flavonoid F3H medium borderline
GtomA05G0025260.1 Flavonoid F3H medium borderline
GtomA05G0025990.1 Flavonoid F3H medium pass
GtomA05G0037080.1 Flavonoid F3H medium borderline
GtomA05G0037080.2 Flavonoid F3H medium borderline
GtomA05G0039370.1 Flavonoid F3H medium borderline
GtomA05G0039380.1 Flavonoid F3H medium borderline
GtomA05G0039390.1 Flavonoid F3H medium borderline
GtomA05G0044150.1 Flavonoid F3H medium borderline
GtomA05G0044150.2 Flavonoid F3H medium borderline
GtomA05G0044170.1 Flavonoid F3H medium borderline
GtomA06G0006210.1 Flavonoid F3H medium borderline
GtomA06G0006230.1 Flavonoid F3H medium borderline
GtomA06G0006230.2 Flavonoid F3H medium borderline
GtomA06G0006240.1 Flavonoid F3H medium borderline
GtomA06G0007980.1 Flavonoid F3H low borderline
GtomA06G0007980.2 Flavonoid F3H low borderline
GtomA06G0007980.3 Flavonoid F3H low borderline
GtomA06G0007980.4 Flavonoid F3H low borderline
GtomA06G0018050.1 Flavonoid F3H medium borderline
GtomA06G0018350.1 Flavonoid F3H low borderline
GtomA06G0018350.2 Flavonoid F3H low borderline
GtomA06G0018350.3 Flavonoid F3H low borderline
GtomA06G0018350.4 Flavonoid F3H low borderline
GtomA06G0018350.5 Flavonoid F3H low borderline
GtomA06G0022370.1 Flavonoid F3H medium borderline
GtomA06G0023340.1 Flavonoid F3H medium borderline
GtomA07G0001110.1 Flavonoid F3H medium borderline
GtomA07G0001110.2 Flavonoid F3H medium borderline
GtomA07G0004580.1 Flavonoid F3H medium borderline
GtomA07G0004790.1 Flavonoid F3H medium borderline
GtomA07G0005210.1 Flavonoid F3H medium borderline
GtomA07G0007460.1 Flavonoid F3H medium borderline
GtomA07G0007460.2 Flavonoid F3H medium borderline
GtomA07G0009860.1 Flavonoid F3H medium borderline
GtomA07G0009870.1 Flavonoid F3H medium borderline
GtomA07G0009880.1 Flavonoid F3H medium borderline
GtomA07G0016830.1 Flavonoid F3H medium borderline
GtomA07G0016840.1 Flavonoid F3H medium borderline
GtomA07G0021370.1 Flavonoid F3H low borderline
GtomA07G0021840.1 Flavonoid F3H medium borderline
GtomA07G0024610.1 Flavonoid F3H medium borderline
GtomA07G0024610.2 Flavonoid F3H medium borderline
GtomA07G0024660.1 Flavonoid F3H medium borderline