PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
GtomD08G0013650.1 Flavonoid F3H medium borderline
GtomD08G0020320.1 Flavonoid F3H medium borderline
GtomD08G0021140.1 Flavonoid F3H low borderline
GtomD08G0021140.2 Flavonoid F3H low borderline
GtomD08G0021140.3 Flavonoid F3H low borderline
GtomD08G0021140.4 Flavonoid F3H low borderline
GtomD08G0021140.5 Flavonoid F3H low borderline
GtomD08G0021140.6 Flavonoid F3H low borderline
GtomD08G0021140.7 Flavonoid F3H low borderline
GtomD08G0021150.1 Flavonoid F3H medium borderline
GtomD08G0021160.1 Flavonoid F3H medium pass
GtomD08G0021160.2 Flavonoid F3H medium pass
GtomD08G0022210.1 Flavonoid F3H medium borderline
GtomD08G0023750.1 Flavonoid F3H medium borderline
GtomD08G0023760.1 Flavonoid F3H medium borderline
GtomD08G0023770.1 Flavonoid F3H medium borderline
GtomD08G0023780.1 Flavonoid F3H medium borderline
GtomD08G0027830.1 Flavonoid F3H medium borderline
GtomD08G0027840.1 Flavonoid F3H medium borderline
GtomD08G0029930.1 Flavonoid F3H medium borderline
GtomD09G0000540.1 Flavonoid F3H medium borderline
GtomD09G0005420.1 Flavonoid F3H medium borderline
GtomD09G0007350.1 Flavonoid F3H medium borderline
GtomD09G0007370.1 Flavonoid F3H medium borderline
GtomD09G0007390.1 Flavonoid F3H medium borderline
GtomD09G0007420.1 Flavonoid F3H medium borderline
GtomD09G0007450.1 Flavonoid F3H medium borderline
GtomD09G0007460.1 Flavonoid F3H medium borderline
GtomD09G0010490.1 Flavonoid F3H low borderline
GtomD09G0011040.1 Flavonoid F3H low borderline
GtomD09G0013010.1 Flavonoid F3H medium borderline
GtomD09G0016850.1 Flavonoid F3H medium borderline
GtomD09G0019300.1 Flavonoid F3H medium borderline
GtomD09G0020800.1 Flavonoid F3H medium borderline
GtomD09G0026350.1 Flavonoid F3H medium borderline
GtomD09G0026360.1 Flavonoid F3H medium borderline
GtomD09G0026370.1 Flavonoid F3H medium borderline
GtomD09G0026380.1 Flavonoid F3H medium borderline
GtomD09G0026390.1 Flavonoid F3H medium borderline
GtomD09G0026400.1 Flavonoid F3H medium borderline
GtomD09G0028140.1 Flavonoid F3H medium borderline
GtomD10G0000980.1 Flavonoid F3H low borderline
GtomD10G0001760.1 Flavonoid F3H medium borderline
GtomD10G0002090.1 Flavonoid F3H low borderline
GtomD10G0003760.1 Flavonoid F3H medium borderline
GtomD10G0003770.1 Flavonoid F3H medium borderline
GtomD10G0007500.1 Flavonoid F3H low borderline
GtomD10G0008420.1 Flavonoid F3H low borderline
GtomD10G0008430.1 Flavonoid F3H low borderline
GtomD10G0008440.1 Flavonoid F3H low borderline