PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Protein/Isoform Record Pathway Family Confidence Status
GtomA01G0019380.1 Alkaloid G8O/G8H medium borderline
GtomA02G0014100.1 Alkaloid G8O/G8H medium borderline
GtomA02G0018700.1 Alkaloid G8O/G8H medium borderline
GtomA03G0009740.1 Alkaloid G8O/G8H medium borderline
GtomA04G0002520.1 Alkaloid G8O/G8H medium borderline
GtomA04G0018280.1 Alkaloid G8O/G8H medium borderline
GtomA05G0020350.1 Alkaloid G8O/G8H medium borderline
GtomA05G0028610.1 Alkaloid G8O/G8H medium borderline
GtomA05G0028810.1 Alkaloid G8O/G8H medium borderline
GtomA05G0030700.1 Alkaloid G8O/G8H medium borderline
GtomA06G0001580.1 Alkaloid G8O/G8H medium borderline
GtomA06G0017480.1 Alkaloid G8O/G8H medium borderline
GtomA06G0021440.1 Alkaloid G8O/G8H medium borderline
GtomA07G0009150.1 Alkaloid G8O/G8H medium borderline
GtomA07G0022410.1 Alkaloid G8O/G8H medium borderline
GtomA07G0022490.1 Alkaloid G8O/G8H medium borderline
GtomA08G0018640.1 Alkaloid G8O/G8H medium borderline
GtomA08G0020330.1 Alkaloid G8O/G8H medium pass
GtomA08G0020340.1 Alkaloid G8O/G8H medium borderline
GtomA08G0020690.1 Alkaloid G8O/G8H medium borderline
GtomA09G0022370.1 Alkaloid G8O/G8H medium borderline
GtomA10G0014670.1 Alkaloid G8O/G8H medium borderline
GtomA10G0021450.1 Alkaloid G8O/G8H medium borderline
GtomA10G0023860.1 Alkaloid G8O/G8H medium borderline
GtomA11G0001020.1 Alkaloid G8O/G8H medium borderline
GtomA11G0024770.1 Alkaloid G8O/G8H medium borderline
GtomA11G0024910.1 Alkaloid G8O/G8H medium borderline
GtomA11G0036310.1 Alkaloid G8O/G8H medium borderline
GtomA11G0036330.1 Alkaloid G8O/G8H medium borderline
GtomA11G0036340.1 Alkaloid G8O/G8H medium borderline
GtomA13G0011910.1 Alkaloid G8O/G8H medium borderline
GtomA13G0023890.1 Alkaloid G8O/G8H medium borderline
GtomD01G0009810.1 Alkaloid G8O/G8H medium borderline
GtomD02G0009110.1 Alkaloid G8O/G8H medium borderline
GtomD02G0009130.1 Alkaloid G8O/G8H medium borderline
GtomD03G0019310.1 Alkaloid G8O/G8H medium borderline
GtomD04G0022460.1 Alkaloid G8O/G8H medium borderline
GtomD05G0029180.1 Alkaloid G8O/G8H medium borderline
GtomD05G0031070.1 Alkaloid G8O/G8H medium borderline
GtomD05G0042740.1 Alkaloid G8O/G8H medium borderline
GtomD05G0042760.1 Alkaloid G8O/G8H low borderline
GtomD05G0042820.1 Alkaloid G8O/G8H low borderline
GtomD06G0019540.1 Alkaloid G8O/G8H medium borderline
GtomD07G0009200.1 Alkaloid G8O/G8H medium pass
GtomD07G0009200.2 Alkaloid G8O/G8H medium pass
GtomD07G0010800.1 Alkaloid G8O/G8H medium borderline
GtomD07G0023280.1 Alkaloid G8O/G8H medium borderline
GtomD07G0023290.1 Alkaloid G8O/G8H medium borderline
GtomD08G0020220.1 Alkaloid G8O/G8H medium borderline
GtomD08G0021810.1 Alkaloid G8O/G8H medium borderline