PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status
GtomA01G0025250.1 Flavonoid PAL high pass
GtomA01G0025250.2 Flavonoid PAL high pass
GtomA04G0010410.1 Flavonoid PAL high pass
GtomA04G0010420.1 Flavonoid PAL high pass
GtomA06G0008940.1 Flavonoid PAL high pass
GtomA09G0017610.1 Flavonoid PAL high pass
GtomA10G0024510.1 Flavonoid PAL high pass
GtomA11G0039050.1 Flavonoid PAL high pass
GtomD01G0026140.1 Flavonoid PAL high pass
GtomD03G0017560.1 Flavonoid PAL low borderline
GtomD04G0014030.1 Flavonoid PAL high pass
GtomD04G0014040.1 Flavonoid PAL medium pass
GtomD04G0014060.1 Flavonoid PAL medium pass
GtomD06G0009400.1 Flavonoid PAL high pass
GtomD09G0017450.1 Flavonoid PAL high pass
GtomD10G0025920.1 Flavonoid PAL high pass
GtomD11G0040880.1 Flavonoid PAL high pass
GtomA01G0025250.1 Phenylpropanoid PAL high pass
GtomA01G0025250.2 Phenylpropanoid PAL high pass
GtomA04G0010410.1 Phenylpropanoid PAL high pass
GtomA04G0010420.1 Phenylpropanoid PAL high pass
GtomA06G0008940.1 Phenylpropanoid PAL high pass
GtomA09G0017610.1 Phenylpropanoid PAL high pass
GtomA10G0024510.1 Phenylpropanoid PAL high pass
GtomA11G0039050.1 Phenylpropanoid PAL high pass
GtomD01G0026140.1 Phenylpropanoid PAL high pass
GtomD03G0017560.1 Phenylpropanoid PAL low borderline
GtomD04G0014030.1 Phenylpropanoid PAL high pass
GtomD04G0014040.1 Phenylpropanoid PAL medium pass
GtomD04G0014060.1 Phenylpropanoid PAL medium pass
GtomD06G0009400.1 Phenylpropanoid PAL high pass
GtomD09G0017450.1 Phenylpropanoid PAL high pass
GtomD10G0025920.1 Phenylpropanoid PAL high pass
GtomD11G0040880.1 Phenylpropanoid PAL high pass
GtomA01G0025250.1 Rosmarinic Acid PAL high pass
GtomA01G0025250.2 Rosmarinic Acid PAL high pass
GtomA04G0010410.1 Rosmarinic Acid PAL high pass
GtomA04G0010420.1 Rosmarinic Acid PAL high pass
GtomA06G0008940.1 Rosmarinic Acid PAL high pass
GtomA09G0017610.1 Rosmarinic Acid PAL high pass
GtomA10G0024510.1 Rosmarinic Acid PAL high pass
GtomA11G0039050.1 Rosmarinic Acid PAL high pass
GtomD01G0026140.1 Rosmarinic Acid PAL high pass
GtomD03G0017560.1 Rosmarinic Acid PAL low borderline
GtomD04G0014030.1 Rosmarinic Acid PAL high pass
GtomD04G0014040.1 Rosmarinic Acid PAL medium pass
GtomD04G0014060.1 Rosmarinic Acid PAL medium pass
GtomD06G0009400.1 Rosmarinic Acid PAL high pass
GtomD09G0017450.1 Rosmarinic Acid PAL high pass
GtomD10G0025920.1 Rosmarinic Acid PAL high pass