PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Protein/Isoform Record Pathway Family Confidence Status
GtomA01G0006870.1 Steroid ROT3/CYP90C1 medium borderline
GtomA01G0006870.2 Steroid ROT3/CYP90C1 medium borderline
GtomA01G0006870.3 Steroid ROT3/CYP90C1 medium pass
GtomA01G0006890.1 Steroid ROT3/CYP90C1 medium borderline
GtomA01G0006890.2 Steroid ROT3/CYP90C1 medium borderline
GtomA02G0020300.1 Steroid ROT3/CYP90C1 medium borderline
GtomA02G0020300.2 Steroid ROT3/CYP90C1 medium borderline
GtomA03G0002530.1 Steroid ROT3/CYP90C1 medium borderline
GtomA03G0002550.1 Steroid ROT3/CYP90C1 medium borderline
GtomA03G0002550.2 Steroid ROT3/CYP90C1 medium borderline
GtomA03G0006590.1 Steroid ROT3/CYP90C1 low borderline
GtomA03G0016030.1 Steroid ROT3/CYP90C1 medium borderline
GtomA05G0024620.1 Steroid ROT3/CYP90C1 low borderline
GtomA06G0004260.1 Steroid ROT3/CYP90C1 low borderline
GtomA06G0018660.1 Steroid ROT3/CYP90C1 medium borderline
GtomA06G0018660.2 Steroid ROT3/CYP90C1 medium borderline
GtomA06G0018660.3 Steroid ROT3/CYP90C1 medium borderline
GtomA06G0018660.4 Steroid ROT3/CYP90C1 medium borderline
GtomA06G0018660.5 Steroid ROT3/CYP90C1 medium borderline
GtomA07G0009260.1 Steroid ROT3/CYP90C1 medium borderline
GtomA07G0009260.2 Steroid ROT3/CYP90C1 medium borderline
GtomA08G0018640.1 Steroid ROT3/CYP90C1 medium borderline
GtomA08G0018650.1 Steroid ROT3/CYP90C1 medium borderline
GtomA08G0018650.2 Steroid ROT3/CYP90C1 medium borderline
GtomA09G0002480.1 Steroid ROT3/CYP90C1 low borderline
GtomA09G0022850.1 Steroid ROT3/CYP90C1 medium borderline
GtomA09G0022860.1 Steroid ROT3/CYP90C1 medium borderline
GtomA10G0014600.1 Steroid ROT3/CYP90C1 medium borderline
GtomA10G0014630.1 Steroid ROT3/CYP90C1 medium borderline
GtomA11G0020380.1 Steroid ROT3/CYP90C1 medium borderline
GtomA12G0025750.1 Steroid ROT3/CYP90C1 medium borderline
GtomA13G0001420.1 Steroid ROT3/CYP90C1 medium borderline
GtomA13G0006690.1 Steroid ROT3/CYP90C1 medium borderline
GtomD01G0006000.1 Steroid ROT3/CYP90C1 medium borderline
GtomD02G0003640.1 Steroid ROT3/CYP90C1 medium borderline
GtomD02G0019820.1 Steroid ROT3/CYP90C1 medium borderline
GtomD03G0001210.1 Steroid ROT3/CYP90C1 medium borderline
GtomD03G0014920.1 Steroid ROT3/CYP90C1 medium borderline
GtomD03G0014920.2 Steroid ROT3/CYP90C1 medium borderline
GtomD03G0014920.3 Steroid ROT3/CYP90C1 medium pass
GtomD03G0018920.1 Steroid ROT3/CYP90C1 medium borderline
GtomD03G0018930.1 Steroid ROT3/CYP90C1 medium borderline
GtomD05G0014730.1 Steroid ROT3/CYP90C1 medium borderline
GtomD05G0016380.1 Steroid ROT3/CYP90C1 low borderline
GtomD05G0025040.1 Steroid ROT3/CYP90C1 low borderline
GtomD05G0042750.1 Steroid ROT3/CYP90C1 medium borderline
GtomD05G0042770.1 Steroid ROT3/CYP90C1 medium borderline
GtomD06G0004530.1 Steroid ROT3/CYP90C1 low borderline
GtomD06G0004560.1 Steroid ROT3/CYP90C1 low borderline
GtomD06G0020850.1 Steroid ROT3/CYP90C1 medium borderline