PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Protein/Isoform Record Pathway Family Confidence Status
GtomA01G0005170.1 Alkaloid SLS medium borderline
GtomA01G0005180.1 Alkaloid SLS medium borderline
GtomA01G0005200.1 Alkaloid SLS medium borderline
GtomA02G0002830.1 Alkaloid SLS medium borderline
GtomA02G0002830.2 Alkaloid SLS medium borderline
GtomA02G0002830.3 Alkaloid SLS medium borderline
GtomA02G0002910.1 Alkaloid SLS medium pass
GtomA02G0002940.1 Alkaloid SLS medium borderline
GtomA05G0002140.1 Alkaloid SLS medium borderline
GtomA05G0003640.1 Alkaloid SLS medium borderline
GtomA05G0010460.1 Alkaloid SLS medium borderline
GtomA06G0006930.1 Alkaloid SLS medium borderline
GtomA07G0000210.1 Alkaloid SLS medium borderline
GtomA07G0004750.1 Alkaloid SLS medium borderline
GtomA08G0028250.1 Alkaloid SLS medium borderline
GtomA10G0000600.1 Alkaloid SLS medium borderline
GtomA10G0023780.1 Alkaloid SLS medium borderline
GtomA11G0009420.1 Alkaloid SLS medium borderline
GtomA11G0009430.1 Alkaloid SLS medium borderline
GtomA11G0009430.2 Alkaloid SLS medium borderline
GtomA11G0017560.1 Alkaloid SLS medium borderline
GtomA11G0017560.2 Alkaloid SLS medium borderline
GtomA12G0016230.1 Alkaloid SLS medium borderline
GtomA13G0006760.1 Alkaloid SLS medium pass
GtomA13G0006760.2 Alkaloid SLS medium pass
GtomD01G0004530.1 Alkaloid SLS medium borderline
GtomD01G0004560.1 Alkaloid SLS medium borderline
GtomD01G0004570.1 Alkaloid SLS medium borderline
GtomD01G0013720.1 Alkaloid SLS low borderline
GtomD02G0003430.1 Alkaloid SLS medium borderline
GtomD02G0003480.1 Alkaloid SLS medium borderline
GtomD02G0003640.1 Alkaloid SLS medium borderline
GtomD02G0004400.1 Alkaloid SLS medium borderline
GtomD05G0002210.1 Alkaloid SLS medium borderline
GtomD05G0010580.1 Alkaloid SLS medium borderline
GtomD05G0021490.1 Alkaloid SLS medium borderline
GtomD06G0007220.1 Alkaloid SLS medium borderline
GtomD07G0000770.1 Alkaloid SLS medium borderline
GtomD07G0004960.1 Alkaloid SLS medium borderline
GtomD07G0022340.1 Alkaloid SLS medium borderline
GtomD07G0022720.1 Alkaloid SLS medium borderline
GtomD07G0022730.1 Alkaloid SLS medium borderline
GtomD08G0021370.1 Alkaloid SLS medium borderline
GtomD08G0029850.1 Alkaloid SLS medium borderline
GtomD10G0025110.1 Alkaloid SLS medium borderline
GtomD11G0009320.1 Alkaloid SLS medium borderline
GtomD11G0009330.1 Alkaloid SLS medium borderline
GtomD11G0017540.1 Alkaloid SLS medium borderline
GtomD11G0018560.1 Alkaloid SLS medium borderline
GtomD12G0016900.1 Alkaloid SLS medium borderline