PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GtomA11G0010170.1 Alkaloid T3O low borderline
GtomA11G0011300.1 Alkaloid T3O high pass
GtomA11G0015400.1 Alkaloid T3O medium borderline
GtomA11G0016740.2 Alkaloid T3O medium pass
GtomA11G0020220.1 Alkaloid T3O medium borderline
GtomA11G0020380.1 Alkaloid T3O medium pass
GtomA11G0021320.1 Alkaloid T3O medium borderline
GtomA11G0021340.1 Alkaloid T3O medium borderline
GtomA11G0021350.1 Alkaloid T3O medium borderline
GtomA11G0022500.1 Alkaloid T3O low borderline
GtomA11G0024780.1 Alkaloid T3O medium borderline
GtomA12G0002650.1 Alkaloid T3O low borderline
GtomA12G0003060.1 Alkaloid T3O medium borderline
GtomA12G0006190.1 Alkaloid T3O medium borderline
GtomA12G0006880.1 Alkaloid T3O medium pass
GtomA12G0008590.1 Alkaloid T3O medium borderline
GtomA12G0013130.1 Alkaloid T3O medium borderline
GtomA12G0013310.1 Alkaloid T3O medium borderline
GtomA12G0018500.1 Alkaloid T3O medium borderline
GtomA12G0018870.1 Alkaloid T3O low borderline
GtomA12G0020940.1 Alkaloid T3O medium borderline
GtomA12G0021350.1 Alkaloid T3O medium borderline
GtomA12G0021360.1 Alkaloid T3O medium borderline
GtomA12G0023120.1 Alkaloid T3O medium pass
GtomA12G0023120.2 Alkaloid T3O medium pass
GtomA12G0023460.1 Alkaloid T3O medium borderline
GtomA12G0023470.1 Alkaloid T3O medium borderline
GtomA12G0025250.1 Alkaloid T3O medium borderline
GtomA12G0025750.1 Alkaloid T3O medium pass
GtomA12G0027350.1 Alkaloid T3O medium borderline
GtomA12G0029510.1 Alkaloid T3O low borderline
GtomA12G0030020.1 Alkaloid T3O medium borderline
GtomA13G0000110.1 Alkaloid T3O medium borderline
GtomA13G0001420.1 Alkaloid T3O medium pass
GtomA13G0001940.1 Alkaloid T3O medium pass
GtomA13G0002530.1 Alkaloid T3O medium borderline
GtomA13G0002560.1 Alkaloid T3O medium borderline
GtomA13G0002580.1 Alkaloid T3O medium borderline
GtomA13G0003370.1 Alkaloid T3O medium borderline
GtomA13G0004550.1 Alkaloid T3O medium pass
GtomA13G0004550.2 Alkaloid T3O medium pass
GtomA13G0006930.1 Alkaloid T3O medium pass
GtomA13G0009320.1 Alkaloid T3O medium pass
GtomA13G0009380.1 Alkaloid T3O medium borderline
GtomA13G0014380.1 Alkaloid T3O medium pass
GtomA13G0014840.1 Alkaloid T3O medium borderline
GtomA13G0014900.1 Alkaloid T3O medium borderline
GtomA13G0016090.1 Alkaloid T3O medium borderline
GtomA13G0016210.1 Alkaloid T3O medium borderline
GtomA13G0016210.2 Alkaloid T3O medium borderline