PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GtomA13G0018600.1 Alkaloid T3O medium pass
GtomA13G0018680.1 Alkaloid T3O medium borderline
GtomA13G0018690.1 Alkaloid T3O medium borderline
GtomD01G0006000.1 Alkaloid T3O medium pass
GtomD01G0006000.2 Alkaloid T3O medium pass
GtomD01G0006030.1 Alkaloid T3O medium pass
GtomD01G0007040.1 Alkaloid T3O medium borderline
GtomD01G0007050.1 Alkaloid T3O medium borderline
GtomD01G0007060.1 Alkaloid T3O medium borderline
GtomD01G0008750.1 Alkaloid T3O medium pass
GtomD01G0009710.1 Alkaloid T3O medium borderline
GtomD01G0009730.1 Alkaloid T3O medium borderline
GtomD01G0009750.1 Alkaloid T3O medium borderline
GtomD01G0009790.1 Alkaloid T3O medium borderline
GtomD01G0009800.1 Alkaloid T3O medium borderline
GtomD01G0009820.1 Alkaloid T3O medium borderline
GtomD01G0013840.1 Alkaloid T3O medium borderline
GtomD01G0023990.1 Alkaloid T3O medium borderline
GtomD01G0024020.1 Alkaloid T3O medium borderline
GtomD01G0024250.1 Alkaloid T3O medium borderline
GtomD02G0000600.1 Alkaloid T3O medium borderline
GtomD02G0011390.1 Alkaloid T3O medium borderline
GtomD02G0011420.1 Alkaloid T3O medium borderline
GtomD02G0016500.1 Alkaloid T3O medium borderline
GtomD02G0019780.1 Alkaloid T3O low borderline
GtomD02G0019820.1 Alkaloid T3O medium borderline
GtomD02G0026320.1 Alkaloid T3O medium pass
GtomD03G0001210.1 Alkaloid T3O medium pass
GtomD03G0002620.1 Alkaloid T3O medium borderline
GtomD03G0002650.1 Alkaloid T3O medium borderline
GtomD03G0002960.1 Alkaloid T3O medium borderline
GtomD03G0005280.1 Alkaloid T3O medium borderline
GtomD03G0012860.1 Alkaloid T3O medium borderline
GtomD03G0012880.1 Alkaloid T3O medium borderline
GtomD03G0014350.1 Alkaloid T3O medium pass
GtomD03G0014920.1 Alkaloid T3O medium pass
GtomD03G0015390.1 Alkaloid T3O medium pass
GtomD03G0015390.2 Alkaloid T3O low borderline
GtomD03G0018920.1 Alkaloid T3O medium pass
GtomD03G0018930.1 Alkaloid T3O medium pass
GtomD03G0019250.1 Alkaloid T3O medium borderline
GtomD03G0019280.1 Alkaloid T3O medium borderline
GtomD03G0019290.1 Alkaloid T3O medium borderline
GtomD03G0019300.1 Alkaloid T3O medium borderline
GtomD03G0019320.1 Alkaloid T3O medium borderline
GtomD04G0001420.1 Alkaloid T3O medium pass
GtomD04G0001420.2 Alkaloid T3O medium pass
GtomD04G0002310.1 Alkaloid T3O low borderline
GtomD04G0002320.1 Alkaloid T3O low borderline
GtomD04G0002520.1 Alkaloid T3O medium pass