PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Protein/Isoform Record Pathway Family Confidence Status
GtomD07G0024970.1 Alkaloid T3O medium borderline
GtomD07G0025490.1 Alkaloid T3O low borderline
GtomD07G0025510.1 Alkaloid T3O medium pass
GtomD07G0025520.1 Alkaloid T3O medium pass
GtomD08G0000920.1 Alkaloid T3O medium pass
GtomD08G0001490.1 Alkaloid T3O low borderline
GtomD08G0002100.1 Alkaloid T3O medium pass
GtomD08G0016750.1 Alkaloid T3O medium pass
GtomD08G0019150.1 Alkaloid T3O medium pass
GtomD08G0020250.1 Alkaloid T3O medium pass
GtomD08G0020250.2 Alkaloid T3O medium pass
GtomD08G0022100.1 Alkaloid T3O medium borderline
GtomD08G0022110.1 Alkaloid T3O medium borderline
GtomD08G0022120.1 Alkaloid T3O medium borderline
GtomD08G0022120.2 Alkaloid T3O medium borderline
GtomD08G0023660.1 Alkaloid T3O medium pass
GtomD09G0003500.1 Alkaloid T3O low borderline
GtomD09G0003520.1 Alkaloid T3O medium pass
GtomD09G0004420.1 Alkaloid T3O low borderline
GtomD09G0005860.1 Alkaloid T3O medium borderline
GtomD09G0005890.1 Alkaloid T3O medium borderline
GtomD09G0005910.1 Alkaloid T3O medium borderline
GtomD09G0011660.1 Alkaloid T3O medium pass
GtomD09G0014660.1 Alkaloid T3O medium borderline
GtomD09G0014690.1 Alkaloid T3O medium borderline
GtomD09G0016460.1 Alkaloid T3O low borderline
GtomD09G0022380.1 Alkaloid T3O medium borderline
GtomD09G0022930.1 Alkaloid T3O medium pass
GtomD09G0023790.1 Alkaloid T3O medium borderline
GtomD09G0023800.1 Alkaloid T3O medium borderline
GtomD10G0001580.1 Alkaloid T3O medium pass
GtomD10G0006350.1 Alkaloid T3O medium borderline
GtomD10G0010670.1 Alkaloid T3O medium borderline
GtomD10G0012270.1 Alkaloid T3O medium pass
GtomD10G0016960.1 Alkaloid T3O medium borderline
GtomD10G0024470.1 Alkaloid T3O medium borderline
GtomD10G0024480.1 Alkaloid T3O medium borderline
GtomD10G0024500.2 Alkaloid T3O medium borderline
GtomD10G0024510.1 Alkaloid T3O medium borderline
GtomD10G0024520.1 Alkaloid T3O medium borderline
GtomD10G0024700.1 Alkaloid T3O low borderline
GtomD10G0025280.1 Alkaloid T3O medium borderline
GtomD10G0025300.1 Alkaloid T3O medium borderline
GtomD10G0025310.1 Alkaloid T3O medium borderline
GtomD10G0025320.1 Alkaloid T3O medium borderline
GtomD10G0025330.1 Alkaloid T3O medium borderline
GtomD10G0028540.1 Alkaloid T3O medium borderline
GtomD10G0028550.1 Alkaloid T3O medium borderline
GtomD10G0029730.1 Alkaloid T3O medium pass
GtomD10G0031280.1 Alkaloid T3O medium pass