PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GtomD11G0000820.1 Alkaloid T3O medium borderline
GtomD11G0004150.1 Alkaloid T3O medium borderline
GtomD11G0004250.1 Alkaloid T3O low borderline
GtomD11G0005020.1 Alkaloid T3O medium borderline
GtomD11G0010130.1 Alkaloid T3O low borderline
GtomD11G0015330.1 Alkaloid T3O medium borderline
GtomD11G0016690.1 Alkaloid T3O medium pass
GtomD11G0020460.1 Alkaloid T3O medium borderline
GtomD11G0020630.1 Alkaloid T3O medium pass
GtomD11G0021120.1 Alkaloid T3O medium pass
GtomD11G0021120.2 Alkaloid T3O medium pass
GtomD11G0021610.1 Alkaloid T3O medium borderline
GtomD11G0024690.1 Alkaloid T3O medium borderline
GtomD12G0004680.1 Alkaloid T3O medium borderline
GtomD12G0006350.1 Alkaloid T3O medium borderline
GtomD12G0007050.1 Alkaloid T3O medium pass
GtomD12G0008560.1 Alkaloid T3O medium borderline
GtomD12G0013930.1 Alkaloid T3O medium borderline
GtomD12G0019300.1 Alkaloid T3O medium borderline
GtomD12G0019690.1 Alkaloid T3O low borderline
GtomD12G0021710.1 Alkaloid T3O medium borderline
GtomD12G0022170.1 Alkaloid T3O medium borderline
GtomD12G0024160.1 Alkaloid T3O medium pass
GtomD12G0024530.1 Alkaloid T3O medium borderline
GtomD12G0024540.1 Alkaloid T3O medium borderline
GtomD12G0026270.1 Alkaloid T3O medium borderline
GtomD12G0026790.1 Alkaloid T3O medium pass
GtomD12G0028280.1 Alkaloid T3O medium borderline
GtomD12G0030470.1 Alkaloid T3O medium pass
GtomD12G0030500.1 Alkaloid T3O low borderline
GtomD12G0030960.1 Alkaloid T3O medium borderline
GtomD12G0030980.1 Alkaloid T3O medium borderline
GtomD13G0000100.1 Alkaloid T3O medium borderline
GtomD13G0001370.1 Alkaloid T3O medium pass
GtomD13G0002540.1 Alkaloid T3O medium borderline
GtomD13G0003300.1 Alkaloid T3O medium borderline
GtomD13G0004440.1 Alkaloid T3O medium pass
GtomD13G0004440.2 Alkaloid T3O medium pass
GtomD13G0009240.1 Alkaloid T3O medium pass
GtomD13G0009880.1 Alkaloid T3O medium borderline
GtomD13G0009930.1 Alkaloid T3O medium pass
GtomD13G0010950.1 Alkaloid T3O medium borderline
GtomD13G0014780.1 Alkaloid T3O medium pass
GtomD13G0014950.1 Alkaloid T3O medium pass
GtomD13G0016610.1 Alkaloid T3O medium borderline
GtomD13G0016760.1 Alkaloid T3O medium borderline
GtomD13G0016790.1 Alkaloid T3O medium borderline
GtomD13G0019490.1 Alkaloid T3O medium pass
GtomD13G0019570.1 Alkaloid T3O medium borderline
GtomD13G0024970.1 Alkaloid T3O medium borderline