PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
GtomA05G0003450.1 Flavonoid UFGT medium pass
GtomA05G0003460.1 Flavonoid UFGT high pass
GtomA05G0003550.1 Flavonoid UFGT medium pass
GtomA05G0005220.1 Flavonoid UFGT high pass
GtomA05G0007350.1 Flavonoid UFGT high pass
GtomA05G0011710.1 Flavonoid UFGT medium pass
GtomA05G0024360.1 Flavonoid UFGT medium pass
GtomA05G0026540.1 Flavonoid UFGT low borderline
GtomA05G0026540.2 Flavonoid UFGT low borderline
GtomA05G0026540.3 Flavonoid UFGT low borderline
GtomA05G0033880.1 Flavonoid UFGT medium pass
GtomA05G0033880.2 Flavonoid UFGT medium pass
GtomA05G0034480.1 Flavonoid UFGT medium pass
GtomA05G0036610.1 Flavonoid UFGT medium pass
GtomA05G0039200.1 Flavonoid UFGT low borderline
GtomA05G0039210.1 Flavonoid UFGT high pass
GtomA05G0041600.1 Flavonoid UFGT medium pass
GtomA05G0041840.1 Flavonoid UFGT medium pass
GtomA05G0045860.1 Flavonoid UFGT high pass
GtomA05G0045870.1 Flavonoid UFGT high pass
GtomA06G0002320.1 Flavonoid UFGT medium pass
GtomA06G0003530.1 Flavonoid UFGT high pass
GtomA06G0006640.1 Flavonoid UFGT high pass
GtomA06G0023820.1 Flavonoid UFGT high pass
GtomA07G0010390.1 Flavonoid UFGT low borderline
GtomA07G0011720.1 Flavonoid UFGT medium pass
GtomA07G0011730.1 Flavonoid UFGT medium pass
GtomA07G0011770.1 Flavonoid UFGT medium pass
GtomA07G0011780.1 Flavonoid UFGT high pass
GtomA07G0011790.1 Flavonoid UFGT low borderline
GtomA07G0012510.1 Flavonoid UFGT medium pass
GtomA07G0016150.1 Flavonoid UFGT medium pass
GtomA07G0021410.1 Flavonoid UFGT high pass
GtomA07G0021470.1 Flavonoid UFGT medium pass
GtomA07G0022830.1 Flavonoid UFGT medium pass
GtomA07G0025620.1 Flavonoid UFGT medium pass
GtomA07G0025640.1 Flavonoid UFGT medium pass
GtomA07G0026010.1 Flavonoid UFGT medium pass
GtomA08G0009260.1 Flavonoid UFGT medium pass
GtomA08G0010460.1 Flavonoid UFGT high pass
GtomA08G0024720.1 Flavonoid UFGT low borderline
GtomA09G0001100.1 Flavonoid UFGT medium pass
GtomA09G0007000.1 Flavonoid UFGT high pass
GtomA09G0017120.1 Flavonoid UFGT medium pass
GtomA09G0017130.1 Flavonoid UFGT medium pass
GtomA09G0021150.1 Flavonoid UFGT medium pass
GtomA09G0024160.1 Flavonoid UFGT high pass
GtomA09G0024170.1 Flavonoid UFGT medium pass
GtomA09G0024180.1 Flavonoid UFGT low borderline
GtomA09G0024200.1 Flavonoid UFGT medium pass