PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
GtomA13G0007940.1 Flavonoid UFGT medium pass
GtomA13G0009740.1 Flavonoid UFGT medium pass
GtomA13G0018760.1 Flavonoid UFGT high pass
GtomA13G0018770.1 Flavonoid UFGT medium pass
GtomA13G0026780.1 Flavonoid UFGT high pass
GtomA13G0026790.1 Flavonoid UFGT high pass
GtomA13G0027860.1 Flavonoid UFGT medium pass
GtomA13G0027870.1 Flavonoid UFGT low borderline
GtomA13G0027880.1 Flavonoid UFGT medium pass
GtomD01G0006300.1 Flavonoid UFGT high pass
GtomD01G0006310.1 Flavonoid UFGT high pass
GtomD01G0006330.1 Flavonoid UFGT high pass
GtomD01G0006340.1 Flavonoid UFGT high pass
GtomD01G0006450.1 Flavonoid UFGT high pass
GtomD01G0008680.1 Flavonoid UFGT medium pass
GtomD01G0010850.1 Flavonoid UFGT medium pass
GtomD01G0015660.1 Flavonoid UFGT medium pass
GtomD01G0016900.1 Flavonoid UFGT high pass
GtomD01G0017430.1 Flavonoid UFGT medium pass
GtomD01G0023890.1 Flavonoid UFGT medium pass
GtomD02G0000810.1 Flavonoid UFGT medium pass
GtomD02G0000820.1 Flavonoid UFGT medium pass
GtomD02G0000830.1 Flavonoid UFGT medium pass
GtomD02G0001830.1 Flavonoid UFGT medium pass
GtomD02G0002730.1 Flavonoid UFGT medium pass
GtomD02G0002750.1 Flavonoid UFGT medium pass
GtomD02G0002760.1 Flavonoid UFGT medium pass
GtomD02G0002770.1 Flavonoid UFGT medium pass
GtomD02G0002780.1 Flavonoid UFGT medium pass
GtomD02G0005260.1 Flavonoid UFGT medium pass
GtomD02G0008450.1 Flavonoid UFGT high pass
GtomD02G0026000.1 Flavonoid UFGT medium pass
GtomD02G0026010.1 Flavonoid UFGT medium pass
GtomD02G0026020.1 Flavonoid UFGT medium pass
GtomD03G0001690.1 Flavonoid UFGT medium pass
GtomD03G0004380.1 Flavonoid UFGT high pass
GtomD03G0004390.1 Flavonoid UFGT high pass
GtomD03G0004400.1 Flavonoid UFGT medium pass
GtomD03G0004410.1 Flavonoid UFGT high pass
GtomD03G0004430.1 Flavonoid UFGT medium pass
GtomD03G0004470.1 Flavonoid UFGT high pass
GtomD03G0005350.1 Flavonoid UFGT high pass
GtomD03G0009950.1 Flavonoid UFGT high pass
GtomD03G0012440.1 Flavonoid UFGT high pass
GtomD03G0014640.1 Flavonoid UFGT high pass
GtomD03G0017020.1 Flavonoid UFGT medium pass
GtomD03G0017590.1 Flavonoid UFGT high pass
GtomD03G0018490.1 Flavonoid UFGT medium pass
GtomD04G0001060.1 Flavonoid UFGT high pass
GtomD04G0001070.1 Flavonoid UFGT high pass