PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD03G0005740.1 Rosmarinic Acid C4H low borderline
GtomD03G0006400.1 Rosmarinic Acid C4H low borderline
GtomD03G0010780.1 Rosmarinic Acid C4H low borderline
GtomD03G0012860.1 Rosmarinic Acid C4H low borderline
GtomD03G0012880.1 Rosmarinic Acid C4H low borderline
GtomD03G0015390.1 Rosmarinic Acid C4H low borderline
GtomD03G0019250.1 Rosmarinic Acid C4H low borderline
GtomD03G0019280.1 Rosmarinic Acid C4H low borderline
GtomD03G0019290.1 Rosmarinic Acid C4H medium pass
GtomD03G0019300.1 Rosmarinic Acid C4H low borderline
GtomD03G0019300.2 Rosmarinic Acid C4H low borderline
GtomD03G0019320.1 Rosmarinic Acid C4H low borderline
GtomD03G0019330.1 Rosmarinic Acid C4H low borderline
GtomD04G0001420.1 Rosmarinic Acid C4H low borderline
GtomD04G0001420.2 Rosmarinic Acid C4H low borderline
GtomD04G0002520.1 Rosmarinic Acid C4H low borderline
GtomD04G0004450.1 Rosmarinic Acid C4H low borderline
GtomD04G0007010.1 Rosmarinic Acid C4H low borderline
GtomD04G0007010.2 Rosmarinic Acid C4H low borderline
GtomD04G0013190.1 Rosmarinic Acid C4H low borderline
GtomD04G0021300.1 Rosmarinic Acid C4H low borderline
GtomD04G0021310.1 Rosmarinic Acid C4H low borderline
GtomD04G0021310.2 Rosmarinic Acid C4H medium pass
GtomD04G0021310.3 Rosmarinic Acid C4H medium pass
GtomD04G0021320.1 Rosmarinic Acid C4H low borderline
GtomD04G0022460.1 Rosmarinic Acid C4H low borderline
GtomD04G0023390.1 Rosmarinic Acid C4H low borderline
GtomD04G0023400.1 Rosmarinic Acid C4H low borderline
GtomD05G0002210.1 Rosmarinic Acid C4H low borderline
GtomD05G0004680.1 Rosmarinic Acid C4H low borderline
GtomD05G0007040.1 Rosmarinic Acid C4H low borderline
GtomD05G0007540.1 Rosmarinic Acid C4H medium pass
GtomD05G0009090.1 Rosmarinic Acid C4H low borderline
GtomD05G0010580.1 Rosmarinic Acid C4H low borderline
GtomD05G0011930.1 Rosmarinic Acid C4H low borderline
GtomD05G0014730.1 Rosmarinic Acid C4H low borderline
GtomD05G0016360.1 Rosmarinic Acid C4H low borderline
GtomD05G0016370.1 Rosmarinic Acid C4H low borderline
GtomD05G0020670.1 Rosmarinic Acid C4H medium pass
GtomD05G0021500.1 Rosmarinic Acid C4H low borderline
GtomD05G0021500.2 Rosmarinic Acid C4H low borderline
GtomD05G0021500.3 Rosmarinic Acid C4H low borderline
GtomD05G0021770.1 Rosmarinic Acid C4H low borderline
GtomD05G0021780.1 Rosmarinic Acid C4H medium pass
GtomD05G0021790.1 Rosmarinic Acid C4H low borderline
GtomD05G0021810.1 Rosmarinic Acid C4H low borderline
GtomD05G0021820.1 Rosmarinic Acid C4H medium pass
GtomD05G0021830.1 Rosmarinic Acid C4H low borderline
GtomD05G0021840.1 Rosmarinic Acid C4H low borderline
GtomD05G0021880.1 Rosmarinic Acid C4H medium pass