PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomD04G0022300.1 Rosmarinic Acid TAT medium pass
GtomD05G0013790.1 Rosmarinic Acid TAT medium pass
GtomD05G0013790.2 Rosmarinic Acid TAT medium pass
GtomD07G0011380.1 Rosmarinic Acid TAT medium pass
GtomD08G0020260.1 Rosmarinic Acid TAT medium pass
GtomD10G0021870.1 Rosmarinic Acid TAT medium pass
GtomD10G0025640.1 Rosmarinic Acid TAT low borderline
GtomD10G0029040.1 Rosmarinic Acid TAT low borderline
GtomD10G0029050.1 Rosmarinic Acid TAT low borderline
GtomD11G0001160.1 Rosmarinic Acid TAT low borderline
GtomD12G0016540.1 Rosmarinic Acid TAT low borderline
GtomD12G0017760.1 Rosmarinic Acid TAT medium pass
GtomD12G0024080.1 Rosmarinic Acid TAT low borderline
GtomD13G0007870.1 Rosmarinic Acid TAT medium pass
GtomD13G0007870.2 Rosmarinic Acid TAT medium pass
GtomD13G0007870.3 Rosmarinic Acid TAT medium pass
GtomD13G0018570.1 Rosmarinic Acid TAT medium pass
GtomA03G0022470.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA03G0022470.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA03G0022470.3 Steroid BR6OX1/CYP85A1 medium borderline
GtomA04G0002520.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA05G0004540.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA05G0004540.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA05G0021550.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA05G0021970.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA06G0000910.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA06G0000910.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA06G0001700.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA06G0013120.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA07G0005970.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA07G0005970.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA07G0009260.3 Steroid BR6OX1/CYP85A1 medium borderline
GtomA07G0020940.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA08G0017580.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA08G0018630.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA09G0022960.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA10G0000600.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA11G0001010.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA11G0001020.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA12G0023120.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA12G0023120.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA12G0025250.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA12G0030030.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA12G0030060.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA13G0000680.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0000680.2 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0000710.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0000710.2 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0000750.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0000750.2 Steroid BR6OX1/CYP85A1 low borderline