PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomA13G0000760.1 Steroid BR6OX1/CYP85A1 low borderline
GtomA13G0004550.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomA13G0004550.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA13G0014580.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD02G0026320.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD03G0015390.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomD05G0004680.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD05G0021880.1 Steroid BR6OX1/CYP85A1 low borderline
GtomD05G0022310.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD06G0001030.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD06G0001030.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomD06G0001030.3 Steroid BR6OX1/CYP85A1 medium borderline
GtomD06G0001810.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD06G0001900.1 Steroid BR6OX1/CYP85A1 low borderline
GtomD06G0014370.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD07G0009350.3 Steroid BR6OX1/CYP85A1 medium borderline
GtomD08G0019150.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD10G0027540.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD12G0024160.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD12G0026270.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD12G0030960.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD13G0000650.1 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0000660.1 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0000690.1 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0000690.2 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0000690.3 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0000690.4 Steroid BR6OX1/CYP85A1 low borderline
GtomD13G0004440.1 Steroid BR6OX1/CYP85A1 medium borderline
GtomD13G0004440.2 Steroid BR6OX1/CYP85A1 medium borderline
GtomA01G0005180.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0005190.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0005200.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0005210.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0007830.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0010490.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0011180.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0013950.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0019380.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0023130.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0024490.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002790.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002800.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002810.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002830.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002830.2 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002830.3 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002840.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002890.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002930.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA02G0002960.1 Steroid BR6OX2/CYP85A2 low borderline