PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD13G0016760.1 Phenylpropanoid C3'H/CYP98A medium borderline
GtomD13G0016790.1 Phenylpropanoid C3'H/CYP98A medium borderline
GtomD13G0019490.1 Phenylpropanoid C3'H/CYP98A low borderline
GtomD13G0019560.1 Phenylpropanoid C3'H/CYP98A medium borderline
GtomD13G0019570.1 Phenylpropanoid C3'H/CYP98A medium borderline
GtomD13G0024970.1 Phenylpropanoid C3'H/CYP98A medium borderline
GtomD13G0028680.1 Phenylpropanoid C3'H/CYP98A medium borderline
Gtomscaffold_3360001690.1 Phenylpropanoid C3'H/CYP98A low borderline
Gtomscaffold_3360001710.1 Phenylpropanoid C3'H/CYP98A low borderline
GtomA02G0002780.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002810.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002830.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002830.2 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002830.3 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002840.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002870.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002900.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002910.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA02G0002920.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0002940.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA02G0010190.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA04G0018950.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA04G0018960.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA05G0021450.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA05G0028610.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA06G0001580.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA06G0001610.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA07G0006530.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA08G0020330.1 Phenylpropanoid C4H/CYP73A medium pass
GtomA10G0023650.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA11G0021330.1 Phenylpropanoid C4H/CYP73A low borderline
GtomA13G0004290.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0004310.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0006690.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0006750.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0009180.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0009210.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomA13G0009870.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003380.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003410.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003440.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003450.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003490.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003500.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003530.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003550.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003570.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003580.1 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003580.2 Phenylpropanoid C4H/CYP73A medium borderline
GtomD02G0003600.1 Phenylpropanoid C4H/CYP73A low borderline