PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD01G0006460.2 Alkaloid CODM/T6ODM medium borderline
GtomD01G0008220.1 Alkaloid CODM/T6ODM medium borderline
GtomD01G0016390.1 Alkaloid CODM/T6ODM medium borderline
GtomD01G0016400.1 Alkaloid CODM/T6ODM medium borderline
GtomD01G0026400.1 Alkaloid CODM/T6ODM medium borderline
GtomD01G0027610.1 Alkaloid CODM/T6ODM medium borderline
GtomD02G0005890.1 Alkaloid CODM/T6ODM medium borderline
GtomD02G0005900.1 Alkaloid CODM/T6ODM medium borderline
GtomD02G0006480.1 Alkaloid CODM/T6ODM medium borderline
GtomD02G0017200.1 Alkaloid CODM/T6ODM medium borderline
GtomD02G0017940.1 Alkaloid CODM/T6ODM medium borderline
GtomD03G0008880.1 Alkaloid CODM/T6ODM medium borderline
GtomD03G0008910.1 Alkaloid CODM/T6ODM medium borderline
GtomD04G0002780.1 Alkaloid CODM/T6ODM medium borderline
GtomD04G0007630.1 Alkaloid CODM/T6ODM medium borderline
GtomD04G0008160.1 Alkaloid CODM/T6ODM medium borderline
GtomD04G0015260.1 Alkaloid CODM/T6ODM medium borderline
GtomD05G0001580.1 Alkaloid CODM/T6ODM medium borderline
GtomD05G0018590.1 Alkaloid CODM/T6ODM medium borderline
GtomD05G0018590.2 Alkaloid CODM/T6ODM medium borderline
GtomD05G0024490.1 Alkaloid CODM/T6ODM medium borderline
GtomD06G0020220.1 Alkaloid CODM/T6ODM medium borderline
GtomD06G0024630.1 Alkaloid CODM/T6ODM medium borderline
GtomD06G0025690.1 Alkaloid CODM/T6ODM medium borderline
GtomD07G0000050.1 Alkaloid CODM/T6ODM medium borderline
GtomD07G0004730.1 Alkaloid CODM/T6ODM medium borderline
GtomD07G0004990.1 Alkaloid CODM/T6ODM medium borderline
GtomD07G0005430.1 Alkaloid CODM/T6ODM medium borderline
GtomD07G0025630.1 Alkaloid CODM/T6ODM medium borderline
GtomD08G0013650.1 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.1 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.2 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.3 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.4 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.5 Alkaloid CODM/T6ODM medium borderline
GtomD08G0021140.6 Alkaloid CODM/T6ODM medium borderline
GtomD08G0022210.1 Alkaloid CODM/T6ODM medium borderline
GtomD08G0027830.1 Alkaloid CODM/T6ODM medium borderline
GtomD08G0027840.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0005420.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007370.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007390.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007400.1 Alkaloid CODM/T6ODM low borderline
GtomD09G0007420.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007450.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007460.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0007460.2 Alkaloid CODM/T6ODM medium borderline
GtomD09G0011040.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0013010.1 Alkaloid CODM/T6ODM medium borderline
GtomD09G0019300.1 Alkaloid CODM/T6ODM medium borderline