PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD06G0002490.3 Rosmarinic Acid RAS low borderline
GtomD06G0002490.4 Rosmarinic Acid RAS low borderline
GtomD06G0002490.5 Rosmarinic Acid RAS low borderline
GtomD06G0007530.1 Rosmarinic Acid RAS medium pass
GtomD06G0008090.1 Rosmarinic Acid RAS low borderline
GtomD06G0017100.1 Rosmarinic Acid RAS low borderline
GtomD06G0025180.1 Rosmarinic Acid RAS medium pass
GtomD06G0025200.1 Rosmarinic Acid RAS medium pass
GtomD06G0025200.2 Rosmarinic Acid RAS medium pass
GtomD06G0025290.1 Rosmarinic Acid RAS medium pass
GtomD06G0025290.2 Rosmarinic Acid RAS medium pass
GtomD06G0025300.1 Rosmarinic Acid RAS medium pass
GtomD06G0025310.1 Rosmarinic Acid RAS medium pass
GtomD06G0025320.1 Rosmarinic Acid RAS medium pass
GtomD06G0025320.2 Rosmarinic Acid RAS medium pass
GtomD06G0025330.1 Rosmarinic Acid RAS medium pass
GtomD06G0025340.1 Rosmarinic Acid RAS medium pass
GtomD06G0025340.2 Rosmarinic Acid RAS medium pass
GtomD06G0025350.1 Rosmarinic Acid RAS medium pass
GtomD06G0025350.2 Rosmarinic Acid RAS medium pass
GtomD08G0007140.1 Rosmarinic Acid RAS low borderline
GtomD08G0007140.2 Rosmarinic Acid RAS low borderline
GtomD08G0007140.3 Rosmarinic Acid RAS low borderline
GtomD08G0007140.4 Rosmarinic Acid RAS low borderline
GtomD08G0018110.1 Rosmarinic Acid RAS low borderline
GtomD10G0003410.1 Rosmarinic Acid RAS low borderline
GtomD10G0014130.1 Rosmarinic Acid RAS medium pass
GtomD10G0014130.2 Rosmarinic Acid RAS medium pass
GtomD10G0014130.3 Rosmarinic Acid RAS medium pass
GtomD10G0014150.1 Rosmarinic Acid RAS medium pass
GtomD10G0014240.1 Rosmarinic Acid RAS medium pass
GtomD10G0014250.1 Rosmarinic Acid RAS medium pass
GtomD10G0031760.1 Rosmarinic Acid RAS low borderline
GtomD11G0011840.1 Rosmarinic Acid RAS low borderline
GtomD12G0003830.1 Rosmarinic Acid RAS low borderline
GtomD12G0032260.1 Rosmarinic Acid RAS low borderline
GtomD13G0001710.1 Rosmarinic Acid RAS low borderline
GtomD13G0013270.1 Rosmarinic Acid RAS medium pass
GtomD13G0013280.1 Rosmarinic Acid RAS medium pass
GtomD13G0013290.1 Rosmarinic Acid RAS medium pass
GtomD13G0013300.1 Rosmarinic Acid RAS medium pass
Gtomscaffold_3520001730.1 Rosmarinic Acid RAS medium pass
GtomA01G0012490.1 Rosmarinic Acid TAT medium pass
GtomA01G0012510.1 Rosmarinic Acid TAT medium pass
GtomA03G0015710.1 Rosmarinic Acid TAT medium pass
GtomA03G0018580.1 Rosmarinic Acid TAT medium pass
GtomA03G0018590.1 Rosmarinic Acid TAT medium pass
GtomA03G0018590.2 Rosmarinic Acid TAT medium pass
GtomA04G0012290.1 Rosmarinic Acid TAT low borderline
GtomA04G0018130.1 Rosmarinic Acid TAT medium pass