PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD04G0022170.2 Alkaloid COR medium pass
GtomD09G0017960.1 Alkaloid COR medium pass
GtomD09G0017960.2 Alkaloid COR medium pass
GtomD09G0017970.1 Alkaloid COR medium pass
GtomD11G0041230.1 Alkaloid COR medium pass
GtomD12G0018740.1 Alkaloid COR medium pass
GtomD12G0018740.2 Alkaloid COR medium pass
GtomD13G0000790.1 Alkaloid COR medium pass
GtomD13G0000810.1 Alkaloid COR medium pass
GtomA03G0014130.1 Alkaloid CYP719 medium borderline
GtomA03G0014130.2 Alkaloid CYP719 medium borderline
GtomA05G0021450.1 Alkaloid CYP719 medium borderline
GtomA07G0021690.1 Alkaloid CYP719 low borderline
GtomA08G0015290.1 Alkaloid CYP719 medium borderline
GtomA08G0015290.2 Alkaloid CYP719 medium borderline
GtomA08G0015290.3 Alkaloid CYP719 medium borderline
GtomA08G0015290.4 Alkaloid CYP719 medium borderline
GtomA09G0008380.1 Alkaloid CYP719 medium borderline
GtomA10G0001610.1 Alkaloid CYP719 medium borderline
GtomA11G0017540.1 Alkaloid CYP719 low borderline
GtomD03G0006400.1 Alkaloid CYP719 medium borderline
GtomD07G0022560.1 Alkaloid CYP719 low borderline
GtomD11G0017520.1 Alkaloid CYP719 low borderline
GtomD11G0037860.1 Alkaloid CYP719 medium borderline
GtomD13G0010940.1 Alkaloid CYP719 medium borderline
GtomA06G0001610.1 Alkaloid CYP80B1 medium borderline
GtomA07G0022480.1 Alkaloid CYP80B1 medium borderline
GtomA08G0026020.1 Alkaloid CYP80B1 medium borderline
GtomA11G0001000.1 Alkaloid CYP80B1 medium borderline
GtomA11G0001010.1 Alkaloid CYP80B1 medium borderline
GtomA11G0021330.1 Alkaloid CYP80B1 medium borderline
GtomD01G0007070.1 Alkaloid CYP80B1 low borderline
GtomD05G0042810.1 Alkaloid CYP80B1 medium borderline
GtomD06G0001840.1 Alkaloid CYP80B1 medium borderline
GtomD07G0023260.1 Alkaloid CYP80B1 medium borderline
GtomD08G0022080.1 Alkaloid CYP80B1 medium borderline
GtomD08G0022160.1 Alkaloid CYP80B1 medium borderline
GtomD08G0027510.1 Alkaloid CYP80B1 medium borderline
GtomA01G0023760.1 Alkaloid CYP80F1 low borderline
GtomA03G0024760.1 Alkaloid CYP80F1 low borderline
GtomA06G0001570.1 Alkaloid CYP80F1 medium borderline
GtomA10G0001980.1 Alkaloid CYP80F1 low borderline
GtomD02G0028580.1 Alkaloid CYP80F1 low borderline
GtomD10G0002050.1 Alkaloid CYP80F1 low borderline
GtomD10G0024100.1 Alkaloid CYP80F1 low borderline
GtomD11G0000800.1 Alkaloid CYP80F1 medium borderline
GtomA01G0019380.1 Alkaloid G8O/G8H medium borderline
GtomA02G0014100.1 Alkaloid G8O/G8H medium borderline
GtomA02G0018700.1 Alkaloid G8O/G8H medium borderline
GtomA03G0009740.1 Alkaloid G8O/G8H medium borderline