PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA09G0003290.4 Alkaloid GS low borderline
GtomA09G0003290.5 Alkaloid GS low borderline
GtomA09G0003290.6 Alkaloid GS low borderline
GtomA09G0005110.1 Alkaloid GS medium pass
GtomA10G0002430.1 Alkaloid GS low borderline
GtomA10G0016870.1 Alkaloid GS low borderline
GtomA10G0016870.2 Alkaloid GS low borderline
GtomA10G0018520.1 Alkaloid GS medium pass
GtomA11G0023460.1 Alkaloid GS medium pass
GtomA11G0023470.1 Alkaloid GS high pass
GtomA11G0023490.1 Alkaloid GS high pass
GtomA12G0002330.1 Alkaloid GS high pass
GtomA12G0027690.1 Alkaloid GS high pass
GtomA12G0027700.1 Alkaloid GS medium pass
GtomA12G0027700.2 Alkaloid GS medium pass
GtomA12G0027700.3 Alkaloid GS medium pass
GtomA12G0027700.4 Alkaloid GS medium pass
GtomA12G0027700.5 Alkaloid GS medium pass
GtomA12G0029680.1 Alkaloid GS medium pass
GtomA12G0029690.1 Alkaloid GS medium pass
GtomA12G0029700.1 Alkaloid GS medium pass
GtomA13G0000990.1 Alkaloid GS low borderline
GtomA13G0001000.1 Alkaloid GS low borderline
GtomD01G0006390.1 Alkaloid GS low borderline
GtomD01G0006390.2 Alkaloid GS low borderline
GtomD02G0020580.1 Alkaloid GS low borderline
GtomD02G0026030.1 Alkaloid GS medium pass
GtomD03G0003900.1 Alkaloid GS high pass
GtomD03G0003900.2 Alkaloid GS high pass
GtomD03G0003920.1 Alkaloid GS high pass
GtomD03G0003920.2 Alkaloid GS high pass
GtomD03G0005520.1 Alkaloid GS high pass
GtomD03G0016470.1 Alkaloid GS low borderline
GtomD04G0006540.1 Alkaloid GS low borderline
GtomD04G0011100.1 Alkaloid GS low borderline
GtomD04G0011100.2 Alkaloid GS low borderline
GtomD05G0018200.1 Alkaloid GS low borderline
GtomD05G0018210.1 Alkaloid GS low borderline
GtomD05G0020270.1 Alkaloid GS high pass
GtomD05G0030850.1 Alkaloid GS low borderline
GtomD06G0004260.1 Alkaloid GS low borderline
GtomD07G0005270.1 Alkaloid GS low borderline
GtomD07G0005280.1 Alkaloid GS low borderline
GtomD07G0010720.1 Alkaloid GS low borderline
GtomD07G0010730.1 Alkaloid GS low borderline
GtomD07G0010740.1 Alkaloid GS low borderline
GtomD07G0010750.1 Alkaloid GS low borderline
GtomD07G0010750.2 Alkaloid GS low borderline
GtomD07G0010760.1 Alkaloid GS low borderline
GtomD07G0024040.1 Alkaloid GS low borderline