PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD06G0001690.1 Alkaloid IO low borderline
GtomD06G0001710.1 Alkaloid IO low borderline
GtomD06G0001770.1 Alkaloid IO high pass
GtomD06G0001800.1 Alkaloid IO medium borderline
GtomD06G0001830.1 Alkaloid IO medium borderline
GtomD06G0014370.1 Alkaloid IO medium borderline
GtomD06G0026640.1 Alkaloid IO medium borderline
GtomD07G0009350.3 Alkaloid IO low borderline
GtomD07G0009350.4 Alkaloid IO low borderline
GtomD07G0014080.1 Alkaloid IO medium borderline
GtomD08G0013830.1 Alkaloid IO medium borderline
GtomD08G0016190.1 Alkaloid IO medium borderline
GtomD08G0016190.2 Alkaloid IO medium borderline
GtomD08G0020210.1 Alkaloid IO low borderline
GtomD09G0016700.1 Alkaloid IO medium borderline
GtomD10G0030630.1 Alkaloid IO medium borderline
GtomD10G0030640.1 Alkaloid IO medium borderline
GtomD11G0011310.1 Alkaloid IO medium borderline
GtomD11G0040660.1 Alkaloid IO medium borderline
GtomD12G0002770.1 Alkaloid IO low borderline
GtomD12G0004630.1 Alkaloid IO low borderline
GtomD12G0004650.1 Alkaloid IO low borderline
GtomD12G0030970.1 Alkaloid IO medium borderline
GtomD13G0015350.1 Alkaloid IO medium borderline
GtomD13G0019560.1 Alkaloid IO medium borderline
GtomA02G0010130.1 Alkaloid ISY medium pass
GtomA03G0021960.1 Alkaloid ISY medium pass
GtomA05G0022500.1 Alkaloid ISY medium pass
GtomA05G0022510.1 Alkaloid ISY medium pass
GtomA09G0008040.1 Alkaloid ISY medium pass
GtomA09G0008050.1 Alkaloid ISY medium pass
GtomA12G0020810.1 Alkaloid ISY medium pass
GtomA13G0023910.1 Alkaloid ISY medium pass
GtomD02G0011370.1 Alkaloid ISY high pass
GtomD02G0025830.1 Alkaloid ISY medium pass
GtomD05G0022930.1 Alkaloid ISY high pass
GtomD05G0022950.1 Alkaloid ISY medium pass
GtomD09G0008130.1 Alkaloid ISY medium pass
GtomD09G0008140.1 Alkaloid ISY medium pass
GtomD12G0021600.1 Alkaloid ISY medium pass
GtomD13G0024980.1 Alkaloid ISY medium pass
GtomA01G0010090.1 Alkaloid LAMT medium borderline
GtomA03G0023210.1 Alkaloid LAMT medium borderline
GtomA05G0020790.1 Alkaloid LAMT medium borderline
GtomA07G0008730.1 Alkaloid LAMT medium borderline
GtomA10G0021290.1 Alkaloid LAMT medium borderline
GtomA10G0021330.1 Alkaloid LAMT medium borderline
GtomA10G0021350.1 Alkaloid LAMT medium borderline
GtomA10G0021370.1 Alkaloid LAMT medium borderline
GtomA11G0019700.1 Alkaloid LAMT medium borderline