PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD06G0021230.1 Phenylpropanoid LAC medium pass
GtomD06G0021250.1 Phenylpropanoid LAC medium pass
GtomD08G0024510.1 Phenylpropanoid LAC medium pass
GtomD08G0025240.1 Phenylpropanoid LAC medium pass
GtomD09G0018100.1 Phenylpropanoid LAC medium pass
GtomD10G0010830.1 Phenylpropanoid LAC medium pass
GtomD10G0011160.1 Phenylpropanoid LAC low borderline
GtomD10G0029420.1 Phenylpropanoid LAC medium pass
GtomD10G0031590.1 Phenylpropanoid LAC medium pass
GtomD11G0005350.1 Phenylpropanoid LAC low borderline
GtomD11G0011220.1 Phenylpropanoid LAC medium pass
GtomD11G0021280.1 Phenylpropanoid LAC medium pass
GtomD11G0021710.1 Phenylpropanoid LAC low borderline
GtomD11G0021730.1 Phenylpropanoid LAC low borderline
GtomD11G0021730.2 Phenylpropanoid LAC low borderline
GtomD11G0041180.1 Phenylpropanoid LAC medium pass
GtomD11G0041200.1 Phenylpropanoid LAC medium pass
GtomD11G0041340.1 Phenylpropanoid LAC medium pass
GtomD12G0011240.1 Phenylpropanoid LAC medium pass
GtomD12G0011270.1 Phenylpropanoid LAC low borderline
GtomD12G0013800.1 Phenylpropanoid LAC medium pass
GtomD12G0020690.1 Phenylpropanoid LAC low borderline
GtomD13G0002140.1 Phenylpropanoid LAC medium pass
GtomD13G0002550.1 Phenylpropanoid LAC medium pass
GtomD13G0002560.1 Phenylpropanoid LAC medium pass
GtomD13G0002810.1 Phenylpropanoid LAC medium pass
GtomD13G0003650.1 Phenylpropanoid LAC medium pass
GtomD13G0011270.1 Phenylpropanoid LAC medium pass
GtomD13G0026190.1 Phenylpropanoid LAC low borderline
GtomD13G0026200.1 Phenylpropanoid LAC low borderline
GtomD13G0026210.1 Phenylpropanoid LAC low borderline
GtomD13G0026220.1 Phenylpropanoid LAC low borderline
GtomD13G0026230.1 Phenylpropanoid LAC low borderline
GtomD13G0026240.1 Phenylpropanoid LAC low borderline
GtomD13G0027780.1 Phenylpropanoid LAC medium pass
GtomA01G0025250.1 Phenylpropanoid PAL high pass
GtomA01G0025250.2 Phenylpropanoid PAL high pass
GtomA04G0010410.1 Phenylpropanoid PAL high pass
GtomA04G0010420.1 Phenylpropanoid PAL high pass
GtomA06G0008940.1 Phenylpropanoid PAL high pass
GtomA09G0017610.1 Phenylpropanoid PAL high pass
GtomA10G0024510.1 Phenylpropanoid PAL high pass
GtomA11G0039050.1 Phenylpropanoid PAL high pass
GtomD01G0026140.1 Phenylpropanoid PAL high pass
GtomD03G0017560.1 Phenylpropanoid PAL low borderline
GtomD04G0014030.1 Phenylpropanoid PAL high pass
GtomD04G0014040.1 Phenylpropanoid PAL medium pass
GtomD04G0014060.1 Phenylpropanoid PAL medium pass
GtomD06G0009400.1 Phenylpropanoid PAL high pass
GtomD09G0017450.1 Phenylpropanoid PAL high pass