PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Family-Level Assignments
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
GtomA07G0011770.1 Alkaloid 7DLGT high pass
GtomA07G0011780.1 Alkaloid 7DLGT low borderline
GtomA07G0011790.1 Alkaloid 7DLGT medium pass
GtomA07G0012510.1 Alkaloid 7DLGT low borderline
GtomA07G0016150.1 Alkaloid 7DLGT medium pass
GtomA07G0021410.1 Alkaloid 7DLGT medium pass
GtomA07G0021470.1 Alkaloid 7DLGT medium pass
GtomA07G0022830.1 Alkaloid 7DLGT low borderline
GtomA07G0025620.1 Alkaloid 7DLGT low borderline
GtomA07G0025640.1 Alkaloid 7DLGT low borderline
GtomA07G0025660.1 Alkaloid 7DLGT low borderline
GtomA07G0026010.1 Alkaloid 7DLGT medium pass
GtomA08G0009260.1 Alkaloid 7DLGT low borderline
GtomA08G0010460.1 Alkaloid 7DLGT low borderline
GtomA09G0001100.1 Alkaloid 7DLGT low borderline
GtomA09G0007000.1 Alkaloid 7DLGT low borderline
GtomA09G0017120.1 Alkaloid 7DLGT low borderline
GtomA09G0017130.1 Alkaloid 7DLGT medium pass
GtomA09G0021150.1 Alkaloid 7DLGT low borderline
GtomA09G0024160.1 Alkaloid 7DLGT low borderline
GtomA09G0024170.1 Alkaloid 7DLGT low borderline
GtomA09G0024180.1 Alkaloid 7DLGT low borderline
GtomA09G0024200.1 Alkaloid 7DLGT low borderline
GtomA10G0014440.1 Alkaloid 7DLGT low borderline
GtomA10G0017590.1 Alkaloid 7DLGT medium pass
GtomA10G0020880.1 Alkaloid 7DLGT low borderline
GtomA10G0020890.1 Alkaloid 7DLGT medium pass
GtomA10G0020900.1 Alkaloid 7DLGT low borderline
GtomA10G0027430.1 Alkaloid 7DLGT high pass
GtomA10G0027490.1 Alkaloid 7DLGT medium pass
GtomA10G0027500.1 Alkaloid 7DLGT medium pass
GtomA10G0027510.1 Alkaloid 7DLGT medium pass
GtomA10G0027520.1 Alkaloid 7DLGT medium pass
GtomA10G0027520.2 Alkaloid 7DLGT medium pass
GtomA10G0027530.1 Alkaloid 7DLGT medium pass
GtomA10G0027540.1 Alkaloid 7DLGT medium pass
GtomA10G0027550.1 Alkaloid 7DLGT high pass
GtomA10G0028600.1 Alkaloid 7DLGT low borderline
GtomA11G0006130.1 Alkaloid 7DLGT medium pass
GtomA11G0006140.1 Alkaloid 7DLGT high pass
GtomA11G0008370.1 Alkaloid 7DLGT low borderline
GtomA11G0008380.1 Alkaloid 7DLGT medium pass
GtomA11G0010870.1 Alkaloid 7DLGT medium pass
GtomA11G0014880.1 Alkaloid 7DLGT high pass
GtomA11G0015990.1 Alkaloid 7DLGT low borderline
GtomA11G0023360.1 Alkaloid 7DLGT low borderline
GtomA11G0024830.1 Alkaloid 7DLGT medium pass
GtomA11G0038930.1 Alkaloid 7DLGT low borderline
GtomA12G0001620.1 Alkaloid 7DLGT medium pass
GtomA12G0002430.1 Alkaloid 7DLGT low borderline