PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomA07G0009260.1 Alkaloid T3O medium pass
GtomA07G0009260.2 Alkaloid T3O medium pass
GtomA07G0011510.1 Alkaloid T3O medium pass
GtomA07G0021450.1 Alkaloid T3O medium pass
GtomA07G0023870.1 Alkaloid T3O medium pass
GtomA07G0024040.1 Alkaloid T3O medium borderline
GtomA07G0024510.1 Alkaloid T3O low borderline
GtomA08G0000850.1 Alkaloid T3O low borderline
GtomA08G0001410.1 Alkaloid T3O low borderline
GtomA08G0002010.1 Alkaloid T3O medium pass
GtomA08G0012670.1 Alkaloid T3O medium borderline
GtomA08G0017580.1 Alkaloid T3O medium pass
GtomA08G0018630.1 Alkaloid T3O medium pass
GtomA08G0018650.1 Alkaloid T3O medium pass
GtomA08G0018650.2 Alkaloid T3O medium pass
GtomA08G0020630.1 Alkaloid T3O medium borderline
GtomA08G0020640.1 Alkaloid T3O medium borderline
GtomA08G0020650.1 Alkaloid T3O medium borderline
GtomA08G0020660.1 Alkaloid T3O medium borderline
GtomA08G0022080.1 Alkaloid T3O medium pass
GtomA09G0002050.1 Alkaloid T3O medium borderline
GtomA09G0003460.1 Alkaloid T3O low borderline
GtomA09G0003570.1 Alkaloid T3O low borderline
GtomA09G0004520.1 Alkaloid T3O low borderline
GtomA09G0005610.1 Alkaloid T3O medium borderline
GtomA09G0005740.1 Alkaloid T3O medium borderline
GtomA09G0011490.1 Alkaloid T3O low borderline
GtomA09G0015030.1 Alkaloid T3O medium borderline
GtomA09G0015040.1 Alkaloid T3O medium borderline
GtomA09G0015050.1 Alkaloid T3O medium borderline
GtomA09G0015070.1 Alkaloid T3O medium borderline
GtomA09G0016410.1 Alkaloid T3O low borderline
GtomA09G0022310.1 Alkaloid T3O medium borderline
GtomA09G0022320.1 Alkaloid T3O medium borderline
GtomA09G0022340.1 Alkaloid T3O medium borderline
GtomA09G0022350.1 Alkaloid T3O medium borderline
GtomA09G0022360.1 Alkaloid T3O medium borderline
GtomA09G0022850.1 Alkaloid T3O medium pass
GtomA09G0022860.1 Alkaloid T3O medium pass
GtomA09G0023710.1 Alkaloid T3O medium borderline
GtomA09G0023720.1 Alkaloid T3O medium borderline
GtomA10G0001560.1 Alkaloid T3O medium pass
GtomA10G0006230.1 Alkaloid T3O medium borderline
GtomA10G0011320.1 Alkaloid T3O medium borderline
GtomA10G0023080.1 Alkaloid T3O medium borderline
GtomA10G0023090.1 Alkaloid T3O medium borderline
GtomA10G0023110.1 Alkaloid T3O medium borderline
GtomA10G0023120.1 Alkaloid T3O medium borderline
GtomA10G0023130.1 Alkaloid T3O medium borderline
GtomA10G0023150.1 Alkaloid T3O medium borderline