PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
GtomD10G0024500.2 Steroid BR6OX2/CYP85A2 low borderline
GtomD10G0025020.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD10G0025110.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD10G0030630.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD10G0030640.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD11G0000820.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD11G0010130.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD11G0011310.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD11G0024690.1 Steroid BR6OX2/CYP85A2 medium borderline
GtomD11G0026670.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0008560.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0010720.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0013700.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0013930.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0016900.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0019300.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0024540.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0027170.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0028280.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0030950.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD12G0030970.1 Steroid BR6OX2/CYP85A2 medium borderline
GtomD13G0000100.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0002540.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0009880.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0010160.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0016760.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0016790.1 Steroid BR6OX2/CYP85A2 low borderline
GtomD13G0028680.1 Steroid BR6OX2/CYP85A2 low borderline
Gtomscaffold_2600001220.1 Steroid BR6OX2/CYP85A2 low borderline
Gtomscaffold_2600001240.1 Steroid BR6OX2/CYP85A2 low borderline
Gtomscaffold_2600001240.2 Steroid BR6OX2/CYP85A2 low borderline
Gtomscaffold_3360001690.1 Steroid BR6OX2/CYP85A2 low borderline
Gtomscaffold_3360001710.1 Steroid BR6OX2/CYP85A2 low borderline
GtomA01G0011820.1 Steroid CAS medium pass
GtomA01G0023730.1 Steroid CAS medium pass
GtomA01G0023730.2 Steroid CAS medium pass
GtomA01G0023740.1 Steroid CAS medium pass
GtomA04G0000810.1 Steroid CAS medium pass
GtomA04G0003030.1 Steroid CAS medium pass
GtomA04G0003040.1 Steroid CAS medium pass
GtomA04G0003060.1 Steroid CAS medium pass
GtomA04G0003080.1 Steroid CAS medium pass
GtomA04G0003900.1 Steroid CAS medium pass
GtomA04G0003910.1 Steroid CAS low borderline
GtomA04G0006500.1 Steroid CAS medium pass
GtomA04G0014250.1 Steroid CAS medium pass
GtomA05G0012450.1 Steroid CAS medium pass
GtomA05G0012450.2 Steroid CAS medium pass
GtomA05G0012450.3 Steroid CAS medium pass
GtomA05G0012480.1 Steroid CAS medium pass