PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GtomD05G0034620.1 Alkaloid 7DLGT low borderline
GtomD05G0036440.1 Alkaloid 7DLGT medium pass
GtomD05G0043610.1 Alkaloid 7DLGT low borderline
GtomD05G0045010.1 Alkaloid 7DLGT high pass
GtomD05G0045020.1 Alkaloid 7DLGT low borderline
GtomD05G0045040.1 Alkaloid 7DLGT high pass
GtomD06G0002550.1 Alkaloid 7DLGT medium pass
GtomD06G0003750.1 Alkaloid 7DLGT low borderline
GtomD06G0006970.1 Alkaloid 7DLGT low borderline
GtomD06G0024810.1 Alkaloid 7DLGT low borderline
GtomD06G0024830.1 Alkaloid 7DLGT low borderline
GtomD06G0024850.1 Alkaloid 7DLGT low borderline
GtomD06G0024870.1 Alkaloid 7DLGT low borderline
GtomD06G0024900.1 Alkaloid 7DLGT low borderline
GtomD06G0024920.1 Alkaloid 7DLGT low borderline
GtomD06G0024940.1 Alkaloid 7DLGT low borderline
GtomD06G0026130.1 Alkaloid 7DLGT low borderline
GtomD06G0026150.1 Alkaloid 7DLGT low borderline
GtomD07G0008610.1 Alkaloid 7DLGT low borderline
GtomD07G0010430.1 Alkaloid 7DLGT low borderline
GtomD07G0011750.1 Alkaloid 7DLGT medium pass
GtomD07G0011760.1 Alkaloid 7DLGT medium pass
GtomD07G0011830.1 Alkaloid 7DLGT high pass
GtomD07G0011840.1 Alkaloid 7DLGT high pass
GtomD07G0011850.1 Alkaloid 7DLGT high pass
GtomD07G0011850.2 Alkaloid 7DLGT high pass
GtomD07G0011860.1 Alkaloid 7DLGT high pass
GtomD07G0012470.1 Alkaloid 7DLGT low borderline
GtomD07G0016290.1 Alkaloid 7DLGT low borderline
GtomD07G0022270.1 Alkaloid 7DLGT medium pass
GtomD07G0022360.1 Alkaloid 7DLGT medium pass
GtomD07G0022370.1 Alkaloid 7DLGT medium pass
GtomD07G0023670.1 Alkaloid 7DLGT low borderline
GtomD07G0023680.1 Alkaloid 7DLGT low borderline
GtomD07G0026700.1 Alkaloid 7DLGT low borderline
GtomD07G0027040.1 Alkaloid 7DLGT low borderline
GtomD07G0027050.1 Alkaloid 7DLGT medium pass
GtomD08G0004540.1 Alkaloid 7DLGT low borderline
GtomD08G0009540.1 Alkaloid 7DLGT low borderline
GtomD08G0010600.1 Alkaloid 7DLGT medium pass
GtomD08G0010600.2 Alkaloid 7DLGT medium pass
GtomD09G0001120.1 Alkaloid 7DLGT medium pass
GtomD09G0016890.1 Alkaloid 7DLGT medium pass
GtomD09G0016900.1 Alkaloid 7DLGT medium pass
GtomD09G0021190.1 Alkaloid 7DLGT low borderline
GtomD09G0024220.1 Alkaloid 7DLGT low borderline
GtomD09G0024230.1 Alkaloid 7DLGT low borderline
GtomD09G0024240.1 Alkaloid 7DLGT low borderline
GtomD09G0024250.1 Alkaloid 7DLGT low borderline
GtomD10G0014210.1 Alkaloid 7DLGT low borderline