PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
GtomD02G0003710.1 Flavonoid C4H medium borderline
GtomD02G0003710.2 Flavonoid C4H medium borderline
GtomD02G0003710.3 Flavonoid C4H medium borderline
GtomD02G0004380.1 Flavonoid C4H medium borderline
GtomD04G0023390.1 Flavonoid C4H medium borderline
GtomD04G0023400.1 Flavonoid C4H medium borderline
GtomD10G0022410.1 Flavonoid C4H medium borderline
GtomD10G0025020.1 Flavonoid C4H medium borderline
GtomD12G0010720.1 Flavonoid C4H medium borderline
GtomD13G0004160.1 Flavonoid C4H medium borderline
GtomD13G0007400.1 Flavonoid C4H medium borderline
GtomD13G0007400.2 Flavonoid C4H medium borderline
GtomD13G0010150.1 Flavonoid C4H medium borderline
GtomD13G0010180.1 Flavonoid C4H medium borderline
GtomD13G0010610.1 Flavonoid C4H low borderline
GtomD13G0028680.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001220.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001230.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001240.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001240.2 Flavonoid C4H medium borderline
GtomA05G0045340.1 Flavonoid CHI medium pass
GtomA07G0002010.1 Flavonoid CHI low borderline
GtomA07G0002010.2 Flavonoid CHI low borderline
GtomA07G0026060.1 Flavonoid CHI medium pass
GtomA07G0026060.2 Flavonoid CHI medium pass
GtomA07G0026060.3 Flavonoid CHI medium pass
GtomA13G0002360.1 Flavonoid CHI medium pass
GtomD04G0001610.1 Flavonoid CHI medium pass
GtomD07G0002130.1 Flavonoid CHI low borderline
GtomD07G0002130.3 Flavonoid CHI low borderline
GtomD07G0027150.1 Flavonoid CHI medium pass
GtomD07G0027150.2 Flavonoid CHI medium pass
GtomD13G0002340.1 Flavonoid CHI medium pass
GtomA02G0003110.1 Flavonoid CHS medium pass
GtomA05G0026090.1 Flavonoid CHS medium pass
GtomA05G0026210.1 Flavonoid CHS medium pass
GtomA05G0026220.1 Flavonoid CHS medium pass
GtomA05G0026250.1 Flavonoid CHS medium pass
GtomA05G0035440.1 Flavonoid CHS medium pass
GtomA08G0016290.1 Flavonoid CHS medium pass
GtomA09G0000010.1 Flavonoid CHS medium pass
GtomA09G0000080.1 Flavonoid CHS medium pass
GtomA10G0014300.1 Flavonoid CHS medium pass
GtomA10G0014310.1 Flavonoid CHS medium pass
GtomA12G0004190.1 Flavonoid CHS medium pass
GtomD02G0003890.1 Flavonoid CHS medium pass
GtomD05G0026350.1 Flavonoid CHS medium pass
GtomD05G0026490.1 Flavonoid CHS medium pass
GtomD05G0026500.1 Flavonoid CHS medium pass
GtomD05G0026510.1 Flavonoid CHS medium pass