PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomD11G0010880.1 Flavonoid ANR low borderline
GtomD12G0005620.1 Flavonoid ANR medium borderline
GtomD12G0005620.2 Flavonoid ANR medium borderline
GtomD12G0005630.1 Flavonoid ANR medium borderline
GtomD12G0027740.1 Flavonoid ANR medium borderline
GtomA01G0004830.1 Flavonoid ANS/LDOX medium borderline
GtomA02G0004610.1 Flavonoid ANS/LDOX low borderline
GtomA02G0005300.1 Flavonoid ANS/LDOX medium borderline
GtomA06G0016280.1 Flavonoid ANS/LDOX medium borderline
GtomA06G0016280.2 Flavonoid ANS/LDOX medium borderline
GtomA09G0007340.1 Flavonoid ANS/LDOX medium borderline
GtomA09G0009520.1 Flavonoid ANS/LDOX medium borderline
GtomA09G0026280.1 Flavonoid ANS/LDOX medium borderline
GtomA09G0026300.1 Flavonoid ANS/LDOX low borderline
GtomA10G0004730.1 Flavonoid ANS/LDOX medium borderline
GtomA10G0004730.2 Flavonoid ANS/LDOX medium borderline
GtomA13G0018320.1 Flavonoid ANS/LDOX medium borderline
GtomD01G0004160.1 Flavonoid ANS/LDOX medium borderline
GtomD01G0008220.1 Flavonoid ANS/LDOX medium borderline
GtomD01G0026400.2 Flavonoid ANS/LDOX medium borderline
GtomD01G0026400.3 Flavonoid ANS/LDOX medium borderline
GtomD05G0001580.1 Flavonoid ANS/LDOX medium borderline
GtomD06G0018090.1 Flavonoid ANS/LDOX medium borderline
GtomD06G0018090.2 Flavonoid ANS/LDOX medium borderline
GtomD07G0015120.1 Flavonoid ANS/LDOX medium borderline
GtomD09G0007460.2 Flavonoid ANS/LDOX medium borderline
GtomD09G0009640.1 Flavonoid ANS/LDOX medium borderline
GtomD10G0004720.1 Flavonoid ANS/LDOX medium borderline
GtomD10G0004720.2 Flavonoid ANS/LDOX medium borderline
GtomD11G0036120.1 Flavonoid ANS/LDOX medium borderline
GtomD12G0000320.1 Flavonoid ANS/LDOX low borderline
GtomD12G0000320.3 Flavonoid ANS/LDOX low borderline
GtomD12G0000320.4 Flavonoid ANS/LDOX low borderline
GtomD13G0019360.1 Flavonoid ANS/LDOX medium borderline
GtomA02G0002500.1 Flavonoid C4H low borderline
GtomA02G0002780.1 Flavonoid C4H medium borderline
GtomA02G0002810.1 Flavonoid C4H medium borderline
GtomA02G0002830.1 Flavonoid C4H medium borderline
GtomA02G0002830.2 Flavonoid C4H medium borderline
GtomA02G0002830.3 Flavonoid C4H medium borderline
GtomA02G0002840.1 Flavonoid C4H medium borderline
GtomA02G0002870.1 Flavonoid C4H medium borderline
GtomA02G0002900.1 Flavonoid C4H medium borderline
GtomA02G0002910.1 Flavonoid C4H low borderline
GtomA02G0002920.1 Flavonoid C4H medium borderline
GtomA02G0002940.1 Flavonoid C4H medium borderline
GtomA04G0018950.1 Flavonoid C4H medium borderline
GtomA04G0018960.1 Flavonoid C4H medium borderline
GtomA08G0020330.1 Flavonoid C4H medium pass
GtomA10G0021240.1 Flavonoid C4H medium borderline