PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

5872
Candidate Protein Records
4696
Pathway-Level Records
11761
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GtomA10G0023650.1 Flavonoid C4H medium borderline
GtomA13G0004290.1 Flavonoid C4H medium borderline
GtomA13G0004310.1 Flavonoid C4H medium borderline
GtomA13G0006750.1 Flavonoid C4H medium borderline
GtomA13G0009180.1 Flavonoid C4H medium borderline
GtomA13G0009210.1 Flavonoid C4H medium borderline
GtomA13G0009870.1 Flavonoid C4H medium borderline
GtomD02G0003380.1 Flavonoid C4H medium borderline
GtomD02G0003410.1 Flavonoid C4H medium borderline
GtomD02G0003440.1 Flavonoid C4H medium borderline
GtomD02G0003450.1 Flavonoid C4H medium borderline
GtomD02G0003490.1 Flavonoid C4H medium borderline
GtomD02G0003500.1 Flavonoid C4H medium borderline
GtomD02G0003530.1 Flavonoid C4H medium borderline
GtomD02G0003550.1 Flavonoid C4H medium borderline
GtomD02G0003570.1 Flavonoid C4H medium borderline
GtomD02G0003580.1 Flavonoid C4H medium borderline
GtomD02G0003580.2 Flavonoid C4H medium borderline
GtomD02G0003600.1 Flavonoid C4H low borderline
GtomD02G0003600.2 Flavonoid C4H low borderline
GtomD02G0003600.3 Flavonoid C4H low borderline
GtomD02G0003600.4 Flavonoid C4H low borderline
GtomD02G0003600.5 Flavonoid C4H low borderline
GtomD02G0003600.6 Flavonoid C4H low borderline
GtomD02G0003610.1 Flavonoid C4H medium borderline
GtomD02G0003620.1 Flavonoid C4H medium borderline
GtomD02G0003630.1 Flavonoid C4H medium borderline
GtomD02G0003640.1 Flavonoid C4H medium borderline
GtomD02G0003650.1 Flavonoid C4H medium borderline
GtomD02G0003660.1 Flavonoid C4H medium borderline
GtomD02G0003680.1 Flavonoid C4H medium borderline
GtomD02G0003710.1 Flavonoid C4H medium borderline
GtomD02G0003710.2 Flavonoid C4H medium borderline
GtomD02G0003710.3 Flavonoid C4H medium borderline
GtomD02G0004380.1 Flavonoid C4H medium borderline
GtomD04G0023390.1 Flavonoid C4H medium borderline
GtomD04G0023400.1 Flavonoid C4H medium borderline
GtomD10G0022410.1 Flavonoid C4H medium borderline
GtomD10G0025020.1 Flavonoid C4H medium borderline
GtomD12G0010720.1 Flavonoid C4H medium borderline
GtomD13G0004160.1 Flavonoid C4H medium borderline
GtomD13G0007400.1 Flavonoid C4H medium borderline
GtomD13G0007400.2 Flavonoid C4H medium borderline
GtomD13G0010150.1 Flavonoid C4H medium borderline
GtomD13G0010180.1 Flavonoid C4H medium borderline
GtomD13G0010610.1 Flavonoid C4H low borderline
GtomD13G0028680.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001220.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001230.1 Flavonoid C4H medium borderline
Gtomscaffold_2600001240.1 Flavonoid C4H medium borderline