PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene20375 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene20998 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene21059 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene21260 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene21696 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene21828 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene22016 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene22043 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene22048 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene22130 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene22284 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene22464 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene22475 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene22584 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene22697 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene23550 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene23716 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene24007 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene25037 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene25111 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene25466 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene25678 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene26065 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene26393 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene26707 Alkaloid T3O medium pass
hippophae_rhamnoides_Hiprha1gene27049 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene27156 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene27438 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene27461 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene29671 Alkaloid T3O low borderline
hippophae_rhamnoides_Hiprha1gene30148 Alkaloid T3O medium borderline
hippophae_rhamnoides_Hiprha1gene30414 Alkaloid T3O medium borderline