PlantSME Plant secondary metabolism enzyme database

Hippophae rhamnoides (hippophae_rhamnoides)

Imported from atlas release summary for Hippophae rhamnoides.

1621
Candidate Protein Records
1269
Pathway-Level Records
3148
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 373 19 BAHD (149) View species results
Phenylpropanoid pathway 305 12 POD (142) View species results
Alkaloid pathway 254 20 NMT (52) View species results
Flavonoid pathway 155 10 UFGT (87) View species results
Rosmarinic acid pathway 107 7 C4H (40) View species results
Steroid pathway 75 14 CAS (27) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1092 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 250 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
hippophae_rhamnoides_Hiprha1gene19276 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene20446 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene21014 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene21017 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene21465 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene21583 Flavonoid F3H medium pass
hippophae_rhamnoides_Hiprha1gene21585 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene21667 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene22664 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene22904 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene23654 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene24025 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene24111 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene24364 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene24523 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene24530 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene25311 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene25346 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene25463 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene25516 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene25763 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene26142 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene26352 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene26416 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene26559 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene26581 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene27279 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene27316 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene27343 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene28396 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene29544 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene30143 Flavonoid F3H low borderline
hippophae_rhamnoides_Hiprha1gene30166 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene30299 Flavonoid F3H medium borderline
hippophae_rhamnoides_Hiprha1gene03062 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene06040 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene10942 Flavonoid FNS low borderline
hippophae_rhamnoides_Hiprha1gene12237 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene12591 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene13083 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene15762 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene19211 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene19464 Flavonoid FNS medium pass
hippophae_rhamnoides_Hiprha1gene19645 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene22130 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene22584 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene22696 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene26192 Flavonoid FNS low borderline
hippophae_rhamnoides_Hiprha1gene27210 Flavonoid FNS medium borderline
hippophae_rhamnoides_Hiprha1gene30148 Flavonoid FNS medium borderline