Leavenworthia alabamica (leavenworthia_alabamica)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.76% Alkaloid pathway 24.06% Phenylpropanoid pathway 23.18% Flavonoid pathway 11.05% Rosmarinic acid pathway 7.27% Steroid pathway 6.69%

Family Distribution

1376 Candidate Genes

BAHD 6.41% C4H 6.02% C3'H/CYP98A 5.6% POD 5.45% NMT 4.36% CYP76 4.0% 4CL 3.7% IFS 3.43%

Other Families 61.04%

More Families (95)

UGT 111 3.34% 7DLGT 99 2.98% UFGT 97 2.92% T3O 91 2.74% F3H 78 2.35% DWF4/CYP90B1 73 2.2% BR6OX2/CYP85A2 68 2.05% CODM/T6ODM 63 1.9% STR 61 1.84% SMT1/SMT2/SMT3 58 1.74% F3'H/CYP75B 54 1.62% CSE 49 1.47% CYP71 49 1.47% SGD 47 1.41% CAD 45 1.35% IFR 44 1.32% TRI/TRII 40 1.2% H6H 37 1.11% PYKS 36 1.08% LAC 31 0.93% BBE 29 0.87% T16H 28 0.84% CAS 28 0.84% ANR 27 0.81% TPS 25 0.75% G8O/G8H 24 0.72% IO 24 0.72% RAS 24 0.72% FNS 23 0.69% CCR 23 0.69% GES 21 0.63% GS 21 0.63% CYP90D1 20 0.6% 7DLH 19 0.57% F5H/CYP84A 19 0.57% TAT 19 0.57% F3'5'H/CYP75A 18 0.54% HCT 17 0.51% GGPPS 17 0.51% LAMT 16 0.48% ANS/LDOX 16 0.48% SLS 15 0.45% PAL 15 0.45% COMT 15 0.45% 8HGO 12 0.36% CPD/CYP90A1 12 0.36% MPO 11 0.33% PMT 11 0.33% CYP51G1 11 0.33% BR6OX1/CYP85A1 11 0.33% COR 10 0.3% 16OMT 10 0.3% CPR 10 0.3% SQE 10 0.3% AACT 10 0.3% FPPS 10 0.3% CYP80B1 9 0.27% CHS 9 0.27% ROT3/CYP90C1 9 0.27% SMO1/SMO2 9 0.27% NCS 8 0.24% CNMT 7 0.21% CYP719 7 0.21% SQS/FDFT1 7 0.21% DFR 6 0.18% CCoAOMT 6 0.18% HMGR 6 0.18% ISY 5 0.15% DET2 5 0.15% DXS 5 0.15% HDS/IspG 5 0.15% MVK 5 0.15% MVD 5 0.15% CYP80F1 4 0.12% HYD1 4 0.12% IDI 4 0.12% TDC 3 0.09% ADC 3 0.09% CHI 3 0.09% HPPR 3 0.09% DWF7 3 0.09% HDR/IspH 3 0.09% PMK 3 0.09% 6OMT_4OMT_SOMT 2 0.06% TYDC_DDC 2 0.06% FLS 2 0.06% DWF1 2 0.06% DWF5 2 0.06% FK 2 0.06% CMK/IspE 2 0.06% MCT/IspD 2 0.06% MDS/IspF 2 0.06% CPI1 1 0.03% HMGS 1 0.03% DXR 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	382	19	BAHD (155)	View species results
Alkaloid pathway	331	22	NMT (92)	View species results
Phenylpropanoid pathway	319	11	POD (162)	View species results
Flavonoid pathway	152	9	UFGT (94)	View species results
Rosmarinic acid pathway	100	7	C4H (36)	View species results
Steroid pathway	92	12	SMT1/SMT2/SMT3 (32)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1198	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	254	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: C3'H/CYP98A

Gene	Pathway	Family	Confidence	Status
LalaLA_scaffold4790310980	Phenylpropanoid	C3'H/CYP98A	high	pass
LalaLA_scaffold4790311000	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5000313640	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5020313760	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5100315400	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5300317690	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5360318610	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5360318680	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5730323470	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5750323890	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold5780324220	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5780324230	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5780324250	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold5780324260	Phenylpropanoid	C3'H/CYP98A	medium	pass
LalaLA_scaffold5970327650	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold6000328930	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold6610336710	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold6830340260	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold7240347300	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold7920355030	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold8100357270	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold8170357890	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold8330359890	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold8780368440	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9130374800	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9410378510	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9460379250	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold9600381430	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold9600381440	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold9600381450	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold9600381460	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9660382360	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9660382430	Phenylpropanoid	C3'H/CYP98A	medium	pass
LalaLA_scaffold9660382440	Phenylpropanoid	C3'H/CYP98A	medium	borderline
LalaLA_scaffold9660382460	Phenylpropanoid	C3'H/CYP98A	low	borderline
LalaLA_scaffold9660382620	Phenylpropanoid	C3'H/CYP98A	medium	borderline