PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
LalaLA_scaffold24460219020 Alkaloid T3O medium borderline
LalaLA_scaffold24690219870 Alkaloid T3O medium pass
LalaLA_scaffold2530223460 Alkaloid T3O medium borderline
LalaLA_scaffold25610225340 Alkaloid T3O medium borderline
LalaLA_scaffold25610225350 Alkaloid T3O medium borderline
LalaLA_scaffold25680225970 Alkaloid T3O medium pass
LalaLA_scaffold2600229470 Alkaloid T3O medium pass
LalaLA_scaffold26410232540 Alkaloid T3O low borderline
LalaLA_scaffold28750248220 Alkaloid T3O medium borderline
LalaLA_scaffold30650259830 Alkaloid T3O medium borderline
LalaLA_scaffold30860261540 Alkaloid T3O medium borderline
LalaLA_scaffold31700266990 Alkaloid T3O medium pass
LalaLA_scaffold33610277610 Alkaloid T3O medium borderline
LalaLA_scaffold34210281730 Alkaloid T3O medium pass
LalaLA_scaffold3560290710 Alkaloid T3O medium borderline
LalaLA_scaffold3680296650 Alkaloid T3O medium pass
LalaLA_scaffold3970299010 Alkaloid T3O medium borderline
LalaLA_scaffold4110301720 Alkaloid T3O medium borderline
LalaLA_scaffold4390306150 Alkaloid T3O medium borderline
LalaLA_scaffold4500307680 Alkaloid T3O medium borderline
LalaLA_scaffold4690309720 Alkaloid T3O medium pass
LalaLA_scaffold4790310960 Alkaloid T3O medium borderline
LalaLA_scaffold4790310980 Alkaloid T3O medium borderline
LalaLA_scaffold4790311000 Alkaloid T3O medium borderline
LalaLA_scaffold5300317690 Alkaloid T3O medium pass
LalaLA_scaffold5730323470 Alkaloid T3O medium borderline
LalaLA_scaffold5780324220 Alkaloid T3O medium borderline
LalaLA_scaffold5780324230 Alkaloid T3O medium borderline
LalaLA_scaffold6610336710 Alkaloid T3O medium pass
LalaLA_scaffold6830340260 Alkaloid T3O low borderline
LalaLA_scaffold7000344150 Alkaloid T3O medium pass
LalaLA_scaffold7390348250 Alkaloid T3O medium borderline
LalaLA_scaffold8100357270 Alkaloid T3O medium borderline
LalaLA_scaffold8170357890 Alkaloid T3O medium borderline
LalaLA_scaffold8330359890 Alkaloid T3O low borderline
LalaLA_scaffold8780368440 Alkaloid T3O medium pass
LalaLA_scaffold9130374800 Alkaloid T3O medium pass
LalaLA_scaffold9460379250 Alkaloid T3O medium borderline
LalaLA_scaffold9600381430 Alkaloid T3O medium borderline
LalaLA_scaffold9600381450 Alkaloid T3O medium borderline
LalaLA_scaffold9660382440 Alkaloid T3O medium borderline