PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
LalaLA_scaffold15070123000 Flavonoid ANR medium borderline
LalaLA_scaffold15990137100 Flavonoid ANR medium borderline
LalaLA_scaffold16080138070 Flavonoid ANR medium borderline
LalaLA_scaffold18700166880 Flavonoid ANR low borderline
LalaLA_scaffold22050198030 Flavonoid ANR medium borderline
LalaLA_scaffold22420201250 Flavonoid ANR medium borderline
LalaLA_scaffold22660202960 Flavonoid ANR medium borderline
LalaLA_scaffold24060214300 Flavonoid ANR medium borderline
LalaLA_scaffold24060214310 Flavonoid ANR medium borderline
LalaLA_scaffold260229090 Flavonoid ANR medium borderline
LalaLA_scaffold27460240710 Flavonoid ANR low borderline
LalaLA_scaffold3180267770 Flavonoid ANR medium borderline
LalaLA_scaffold31980269820 Flavonoid ANR medium borderline
LalaLA_scaffold35270288790 Flavonoid ANR medium borderline
LalaLA_scaffold35510290040 Flavonoid ANR low borderline
LalaLA_scaffold4500307790 Flavonoid ANR medium borderline
LalaLA_scaffold7010344380 Flavonoid ANR medium borderline
LalaLA_scaffold8790368880 Flavonoid ANR medium borderline
LalaLA_C537690037160 Flavonoid ANS/LDOX medium borderline
LalaLA_C707210054260 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold10300063710 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold11270074980 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold13080099300 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold13640106100 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold14110110720 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold17090148500 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold21150189430 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold33170275650 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold690341360 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold7010344260 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold8600365100 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold9290376000 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold9510379980 Flavonoid ANS/LDOX medium borderline
LalaLA_scaffold9530380610 Flavonoid ANS/LDOX medium borderline
LalaLA_C700410052850 Flavonoid C4H low borderline
LalaLA_C705430053940 Flavonoid C4H low borderline
LalaLA_scaffold11770083910 Flavonoid C4H low borderline
LalaLA_scaffold11910084830 Flavonoid C4H low borderline
LalaLA_scaffold17780156860 Flavonoid C4H medium borderline
LalaLA_scaffold18480165290 Flavonoid C4H low borderline
LalaLA_scaffold2110189150 Flavonoid C4H medium borderline
LalaLA_scaffold22590202620 Flavonoid C4H low borderline
LalaLA_scaffold24300217410 Flavonoid C4H medium borderline
LalaLA_scaffold4790310970 Flavonoid C4H low borderline
LalaLA_scaffold5000313640 Flavonoid C4H medium borderline
LalaLA_scaffold5570320910 Flavonoid C4H low borderline
LalaLA_scaffold8210358190 Flavonoid C4H low borderline
LalaLA_scaffold11700082880 Flavonoid CHI medium pass
LalaLA_scaffold6040330110 Flavonoid CHI medium pass
LalaLA_scaffold6040330120 Flavonoid CHI medium pass