Leavenworthia alabamica (leavenworthia_alabamica)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.76% Alkaloid pathway 24.06% Phenylpropanoid pathway 23.18% Flavonoid pathway 11.05% Rosmarinic acid pathway 7.27% Steroid pathway 6.69%

Family Distribution

1376 Candidate Genes

BAHD 6.41% C4H 6.02% C3'H/CYP98A 5.6% POD 5.45% NMT 4.36% CYP76 4.0% 4CL 3.7% IFS 3.43%

Other Families 61.04%

More Families (95)

UGT 111 3.34% 7DLGT 99 2.98% UFGT 97 2.92% T3O 91 2.74% F3H 78 2.35% DWF4/CYP90B1 73 2.2% BR6OX2/CYP85A2 68 2.05% CODM/T6ODM 63 1.9% STR 61 1.84% SMT1/SMT2/SMT3 58 1.74% F3'H/CYP75B 54 1.62% CSE 49 1.47% CYP71 49 1.47% SGD 47 1.41% CAD 45 1.35% IFR 44 1.32% TRI/TRII 40 1.2% H6H 37 1.11% PYKS 36 1.08% LAC 31 0.93% BBE 29 0.87% T16H 28 0.84% CAS 28 0.84% ANR 27 0.81% TPS 25 0.75% G8O/G8H 24 0.72% IO 24 0.72% RAS 24 0.72% FNS 23 0.69% CCR 23 0.69% GES 21 0.63% GS 21 0.63% CYP90D1 20 0.6% 7DLH 19 0.57% F5H/CYP84A 19 0.57% TAT 19 0.57% F3'5'H/CYP75A 18 0.54% HCT 17 0.51% GGPPS 17 0.51% LAMT 16 0.48% ANS/LDOX 16 0.48% SLS 15 0.45% PAL 15 0.45% COMT 15 0.45% 8HGO 12 0.36% CPD/CYP90A1 12 0.36% MPO 11 0.33% PMT 11 0.33% CYP51G1 11 0.33% BR6OX1/CYP85A1 11 0.33% COR 10 0.3% 16OMT 10 0.3% CPR 10 0.3% SQE 10 0.3% AACT 10 0.3% FPPS 10 0.3% CYP80B1 9 0.27% CHS 9 0.27% ROT3/CYP90C1 9 0.27% SMO1/SMO2 9 0.27% NCS 8 0.24% CNMT 7 0.21% CYP719 7 0.21% SQS/FDFT1 7 0.21% DFR 6 0.18% CCoAOMT 6 0.18% HMGR 6 0.18% ISY 5 0.15% DET2 5 0.15% DXS 5 0.15% HDS/IspG 5 0.15% MVK 5 0.15% MVD 5 0.15% CYP80F1 4 0.12% HYD1 4 0.12% IDI 4 0.12% TDC 3 0.09% ADC 3 0.09% CHI 3 0.09% HPPR 3 0.09% DWF7 3 0.09% HDR/IspH 3 0.09% PMK 3 0.09% 6OMT_4OMT_SOMT 2 0.06% TYDC_DDC 2 0.06% FLS 2 0.06% DWF1 2 0.06% DWF5 2 0.06% FK 2 0.06% CMK/IspE 2 0.06% MCT/IspD 2 0.06% MDS/IspF 2 0.06% CPI1 1 0.03% HMGS 1 0.03% DXR 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	382	19	BAHD (155)	View species results
Alkaloid pathway	331	22	NMT (92)	View species results
Phenylpropanoid pathway	319	11	POD (162)	View species results
Flavonoid pathway	152	9	UFGT (94)	View species results
Rosmarinic acid pathway	100	7	C4H (36)	View species results
Steroid pathway	92	12	SMT1/SMT2/SMT3 (32)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1198	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	254	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current pathway filter: Terpenoid pathway

Gene	Pathway	Family	Confidence	Status	Best Target
LalaLA_scaffold29260251340	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LalaLA_scaffold29360252000	Terpenoid	BAHD	medium	pass	BAHD__00087__sp_Q9M3B1_WSD6_ARATH
LalaLA_scaffold29890254650	Terpenoid	BAHD	low	borderline	BAHD__00024__sp_O23393_BIA1_ARATH
LalaLA_scaffold29900254820	Terpenoid	BAHD	low	borderline	BAHD__00073__sp_Q9FF86_DCR_ARATH
LalaLA_scaffold30890261640	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LalaLA_scaffold3090262540	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
LalaLA_scaffold31270264530	Terpenoid	BAHD	low	borderline	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LalaLA_scaffold32290271360	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
LalaLA_scaffold32290271370	Terpenoid	BAHD	medium	pass	BAHD__00066__sp_Q94CK0_WSD7_ARATH
LalaLA_scaffold32290271380	Terpenoid	BAHD	medium	pass	BAHD__00066__sp_Q94CK0_WSD7_ARATH
LalaLA_scaffold32490272690	Terpenoid	BAHD	medium	pass	BAHD__00028__sp_O80467_SDT_ARATH
LalaLA_scaffold32940274630	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
LalaLA_scaffold3370278150	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
LalaLA_scaffold33870278930	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
LalaLA_scaffold34860285710	Terpenoid	BAHD	low	borderline	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
LalaLA_scaffold3530289050	Terpenoid	BAHD	low	borderline	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
LalaLA_scaffold3560290990	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
LalaLA_scaffold35710291660	Terpenoid	BAHD	medium	pass	BAHD__00027__sp_O80437_GPAT6_ARATH
LalaLA_scaffold36140294880	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
LalaLA_scaffold3890298330	Terpenoid	BAHD	medium	pass	BAHD__00055__sp_Q8H780_SCP13_ARATH
LalaLA_scaffold4140302230	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
LalaLA_scaffold4150302340	Terpenoid	BAHD	medium	pass	BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
LalaLA_scaffold420302990	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
LalaLA_scaffold4230303550	Terpenoid	BAHD	low	borderline	BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
LalaLA_scaffold4450306400	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
LalaLA_scaffold4500307800	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
LalaLA_scaffold4500307970	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
LalaLA_scaffold4570308750	Terpenoid	BAHD	medium	pass	BAHD__00054__sp_Q8GYW8_SCT_ARATH
LalaLA_scaffold4780310770	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LalaLA_scaffold4880311530	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
LalaLA_scaffold5070314890	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
LalaLA_scaffold5100316180	Terpenoid	BAHD	medium	pass	BAHD__00069__sp_Q9C5W0_DGAT3_ARATH
LalaLA_scaffold5270317600	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
LalaLA_scaffold5320318110	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
LalaLA_scaffold5320318130	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
LalaLA_scaffold5460319420	Terpenoid	BAHD	low	borderline	BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC
LalaLA_scaffold5750323720	Terpenoid	BAHD	medium	pass	BAHD__00081__sp_Q9LJB4_5MAT_ARATH
LalaLA_scaffold5800324580	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
LalaLA_scaffold5920327240	Terpenoid	BAHD	medium	pass	BAHD__00091__sp_Q9SLD2_DGAT1_ARATH
LalaLA_scaffold5970327590	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
LalaLA_scaffold6000328540	Terpenoid	BAHD	medium	pass	BAHD__00083__sp_Q9LMM0_GPAT4_ARATH
LalaLA_scaffold6010329260	Terpenoid	BAHD	low	borderline	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
LalaLA_scaffold6110331330	Terpenoid	BAHD	low	borderline	BAHD__00097__sp_Q9ZV87_NAPES_ARATH
LalaLA_scaffold6200332050	Terpenoid	BAHD	medium	pass	BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
LalaLA_scaffold6280332870	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
LalaLA_scaffold640334790	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
LalaLA_scaffold6550336050	Terpenoid	BAHD	low	borderline	BAHD__00031__sp_P0DO25_AT9_ACTDE
LalaLA_scaffold6790338630	Terpenoid	BAHD	medium	pass	BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
LalaLA_scaffold6860340970	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
LalaLA_scaffold6930341910	Terpenoid	BAHD	medium	pass	BAHD__00089__sp_Q9SB58_ZDH19_ARATH