PlantSME Plant secondary metabolism enzyme database

Leavenworthia alabamica (leavenworthia_alabamica)

Imported from atlas release summary for Leavenworthia alabamica.

1376
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 382 19 BAHD (155) View species results
Alkaloid pathway 331 22 NMT (92) View species results
Phenylpropanoid pathway 319 11 POD (162) View species results
Flavonoid pathway 152 9 UFGT (94) View species results
Rosmarinic acid pathway 100 7 C4H (36) View species results
Steroid pathway 92 12 SMT1/SMT2/SMT3 (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
LalaLA_scaffold3370278150 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold33870278930 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold3620296240 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold3890298330 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold4170302580 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold4450306400 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold4500307970 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold4780310770 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold5070314950 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold5800324580 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold6740338070 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold7040345020 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold8010355610 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold8270358790 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold8910371210 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold930376320 Steroid SMT1/SMT2/SMT3 low borderline
LalaLA_scaffold9460379000 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_scaffold9460379210 Steroid SMT1/SMT2/SMT3 medium pass
LalaLA_C111130000630 Steroid SQE medium pass
LalaLA_C288490015770 Steroid SQE medium pass
LalaLA_scaffold20320181150 Steroid SQE medium pass
LalaLA_scaffold20320181160 Steroid SQE medium pass
LalaLA_scaffold3490285920 Steroid SQE medium pass
LalaLA_scaffold4340305130 Steroid SQE medium pass
LalaLA_scaffold8620365450 Steroid SQE medium pass
LalaLA_scaffold8620365470 Steroid SQE medium pass
LalaLA_scaffold8620365480 Steroid SQE medium pass
LalaLA_scaffold8800369000 Steroid SQE medium pass
LalaLA_scaffold11510080150 Steroid SQS/FDFT1 low borderline
LalaLA_scaffold11750083610 Steroid SQS/FDFT1 high pass
LalaLA_scaffold2160193050 Steroid SQS/FDFT1 medium pass
LalaLA_scaffold21800195580 Steroid SQS/FDFT1 medium pass
LalaLA_scaffold300256020 Steroid SQS/FDFT1 low borderline
LalaLA_scaffold8950371930 Steroid SQS/FDFT1 high pass
LalaLA_scaffold8950371940 Steroid SQS/FDFT1 high pass