PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0913241.1 Alkaloid NMT low borderline
KAF0913263.1 Alkaloid NMT medium borderline
KAF0913264.1 Alkaloid NMT medium borderline
KAF0913377.1 Alkaloid NMT medium pass
KAF0914038.1 Alkaloid NMT medium borderline
KAF0914290.1 Alkaloid NMT medium pass
KAF0914291.1 Alkaloid NMT medium pass
KAF0914292.1 Alkaloid NMT medium pass
KAF0914995.1 Alkaloid NMT low borderline
KAF0915436.1 Alkaloid NMT medium pass
KAF0916059.1 Alkaloid NMT low borderline
KAF0916787.1 Alkaloid NMT low borderline
KAF0916788.1 Alkaloid NMT medium borderline
KAF0916795.1 Alkaloid NMT medium borderline
KAF0917017.1 Alkaloid NMT low borderline
KAF0917820.1 Alkaloid NMT medium borderline
KAF0919153.1 Alkaloid NMT medium pass
KAF0919540.1 Alkaloid NMT low borderline
KAF0923419.1 Alkaloid NMT medium pass
KAF0924203.1 Alkaloid NMT low borderline
KAF0924207.1 Alkaloid NMT medium borderline
KAF0925098.1 Alkaloid NMT medium pass
KAF0925494.1 Alkaloid NMT medium pass
KAF0926541.1 Alkaloid NMT medium borderline
KAF0930178.1 Alkaloid NMT medium borderline
KAF0931559.1 Alkaloid NMT medium pass
KAF0931560.1 Alkaloid NMT medium pass
KAF0931561.1 Alkaloid NMT medium pass
KAF0931562.1 Alkaloid NMT medium pass
KAF0932185.1 Alkaloid NMT medium pass
KAF0932186.1 Alkaloid NMT medium pass
KAF0933606.1 Alkaloid NMT low borderline
KAF0933607.1 Alkaloid NMT low borderline
KAF0933811.1 Alkaloid NMT low borderline
KAF0934606.1 Alkaloid NMT medium borderline
KAF0934919.1 Alkaloid NMT medium pass
KAF0934999.1 Alkaloid NMT low borderline
KAF0935039.1 Alkaloid NMT medium pass
KAF0935419.1 Alkaloid NMT low borderline
KAF0935420.1 Alkaloid NMT low borderline
KAF0935503.1 Alkaloid NMT medium borderline
KAF0936088.1 Alkaloid NMT low borderline
KAF0910705.1 Alkaloid ODC medium pass
KAF0910706.1 Alkaloid ODC medium pass
KAF0924245.1 Alkaloid ODC low borderline
KAF0892350.1 Alkaloid PMT medium pass
KAF0893337.1 Alkaloid PMT low borderline
KAF0895843.1 Alkaloid PMT low borderline
KAF0898638.1 Alkaloid PMT medium pass
KAF0898639.1 Alkaloid PMT medium pass