PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0898924.1 Alkaloid PMT low borderline
KAF0900801.1 Alkaloid PMT low borderline
KAF0901962.1 Alkaloid PMT low borderline
KAF0901967.1 Alkaloid PMT low borderline
KAF0903492.1 Alkaloid PMT medium pass
KAF0903494.1 Alkaloid PMT medium pass
KAF0903711.1 Alkaloid PMT medium pass
KAF0906464.1 Alkaloid PMT medium pass
KAF0910330.1 Alkaloid PMT medium pass
KAF0911406.1 Alkaloid PMT low borderline
KAF0912122.1 Alkaloid PMT medium pass
KAF0912211.1 Alkaloid PMT medium pass
KAF0916043.1 Alkaloid PMT medium pass
KAF0916115.1 Alkaloid PMT medium pass
KAF0916480.1 Alkaloid PMT medium pass
KAF0916966.1 Alkaloid PMT medium pass
KAF0917268.1 Alkaloid PMT low borderline
KAF0918505.1 Alkaloid PMT medium pass
KAF0921048.1 Alkaloid PMT medium borderline
KAF0923151.1 Alkaloid PMT medium pass
KAF0925344.1 Alkaloid PMT low borderline
KAF0925510.1 Alkaloid PMT low borderline
KAF0925950.1 Alkaloid PMT medium pass
KAF0925996.1 Alkaloid PMT medium pass
KAF0926469.1 Alkaloid PMT medium pass
KAF0928168.1 Alkaloid PMT medium pass
KAF0928169.1 Alkaloid PMT medium pass
KAF0928749.1 Alkaloid PMT medium pass
KAF0928866.1 Alkaloid PMT medium pass
KAF0932034.1 Alkaloid PMT medium borderline
KAF0932035.1 Alkaloid PMT medium borderline
KAF0934427.1 Alkaloid PMT medium borderline
KAF0889148.1 Alkaloid PYKS high pass
KAF0890005.1 Alkaloid PYKS high pass
KAF0890773.1 Alkaloid PYKS low borderline
KAF0890774.1 Alkaloid PYKS low borderline
KAF0890775.1 Alkaloid PYKS low borderline
KAF0891307.1 Alkaloid PYKS low borderline
KAF0894353.1 Alkaloid PYKS high pass
KAF0896317.1 Alkaloid PYKS high pass
KAF0896902.1 Alkaloid PYKS low borderline
KAF0897054.1 Alkaloid PYKS high pass
KAF0897549.1 Alkaloid PYKS medium pass
KAF0897551.1 Alkaloid PYKS high pass
KAF0897552.1 Alkaloid PYKS high pass
KAF0897556.1 Alkaloid PYKS medium pass
KAF0897557.1 Alkaloid PYKS high pass
KAF0898548.1 Alkaloid PYKS low borderline
KAF0898549.1 Alkaloid PYKS high pass
KAF0898747.1 Alkaloid PYKS high pass