PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
KAF0897453.1 Alkaloid 7DLGT low borderline
KAF0897521.1 Alkaloid 7DLGT low borderline
KAF0897523.1 Alkaloid 7DLGT low borderline
KAF0897525.1 Alkaloid 7DLGT low borderline
KAF0897651.1 Alkaloid 7DLGT high pass
KAF0897653.1 Alkaloid 7DLGT medium pass
KAF0898510.1 Alkaloid 7DLGT low borderline
KAF0898511.1 Alkaloid 7DLGT low borderline
KAF0898512.1 Alkaloid 7DLGT low borderline
KAF0898787.1 Alkaloid 7DLGT medium pass
KAF0899737.1 Alkaloid 7DLGT medium pass
KAF0899738.1 Alkaloid 7DLGT medium pass
KAF0899740.1 Alkaloid 7DLGT low borderline
KAF0899741.1 Alkaloid 7DLGT medium pass
KAF0900067.1 Alkaloid 7DLGT medium pass
KAF0900073.1 Alkaloid 7DLGT medium pass
KAF0900074.1 Alkaloid 7DLGT low borderline
KAF0900075.1 Alkaloid 7DLGT medium pass
KAF0900708.1 Alkaloid 7DLGT medium pass
KAF0901985.1 Alkaloid 7DLGT low borderline
KAF0902012.1 Alkaloid 7DLGT medium pass
KAF0902495.1 Alkaloid 7DLGT low borderline
KAF0902622.1 Alkaloid 7DLGT medium pass
KAF0902711.1 Alkaloid 7DLGT medium pass
KAF0902994.1 Alkaloid 7DLGT low borderline
KAF0902995.1 Alkaloid 7DLGT low borderline
KAF0903013.1 Alkaloid 7DLGT low borderline
KAF0903014.1 Alkaloid 7DLGT low borderline
KAF0903430.1 Alkaloid 7DLGT low borderline
KAF0903431.1 Alkaloid 7DLGT low borderline
KAF0903433.1 Alkaloid 7DLGT medium pass
KAF0903436.1 Alkaloid 7DLGT medium pass
KAF0903801.1 Alkaloid 7DLGT low borderline
KAF0904758.1 Alkaloid 7DLGT low borderline
KAF0904761.1 Alkaloid 7DLGT low borderline
KAF0904975.1 Alkaloid 7DLGT low borderline
KAF0905985.1 Alkaloid 7DLGT low borderline
KAF0906290.1 Alkaloid 7DLGT low borderline
KAF0906292.1 Alkaloid 7DLGT medium pass
KAF0906293.1 Alkaloid 7DLGT low borderline
KAF0906296.1 Alkaloid 7DLGT low borderline
KAF0906624.1 Alkaloid 7DLGT medium pass
KAF0906625.1 Alkaloid 7DLGT high pass
KAF0906631.1 Alkaloid 7DLGT medium pass
KAF0906632.1 Alkaloid 7DLGT medium pass
KAF0906712.1 Alkaloid 7DLGT low borderline
KAF0906714.1 Alkaloid 7DLGT low borderline
KAF0906970.1 Alkaloid 7DLGT low borderline
KAF0906996.1 Alkaloid 7DLGT low borderline
KAF0907035.1 Alkaloid 7DLGT low borderline