PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
KAF0907036.1 Alkaloid 7DLGT low borderline
KAF0907038.1 Alkaloid 7DLGT low borderline
KAF0907039.1 Alkaloid 7DLGT medium pass
KAF0907040.1 Alkaloid 7DLGT low borderline
KAF0907043.1 Alkaloid 7DLGT low borderline
KAF0907376.1 Alkaloid 7DLGT low borderline
KAF0907510.1 Alkaloid 7DLGT low borderline
KAF0907675.1 Alkaloid 7DLGT low borderline
KAF0908039.1 Alkaloid 7DLGT medium pass
KAF0908931.1 Alkaloid 7DLGT low borderline
KAF0909006.1 Alkaloid 7DLGT medium pass
KAF0909171.1 Alkaloid 7DLGT low borderline
KAF0909174.1 Alkaloid 7DLGT low borderline
KAF0909176.1 Alkaloid 7DLGT low borderline
KAF0909581.1 Alkaloid 7DLGT medium pass
KAF0910142.1 Alkaloid 7DLGT low borderline
KAF0910360.1 Alkaloid 7DLGT low borderline
KAF0910865.1 Alkaloid 7DLGT low borderline
KAF0910923.1 Alkaloid 7DLGT low borderline
KAF0912189.1 Alkaloid 7DLGT medium pass
KAF0912190.1 Alkaloid 7DLGT medium pass
KAF0912191.1 Alkaloid 7DLGT high pass
KAF0912273.1 Alkaloid 7DLGT medium pass
KAF0912667.1 Alkaloid 7DLGT low borderline
KAF0913110.1 Alkaloid 7DLGT low borderline
KAF0913174.1 Alkaloid 7DLGT medium pass
KAF0913176.1 Alkaloid 7DLGT medium pass
KAF0913580.1 Alkaloid 7DLGT medium pass
KAF0913931.1 Alkaloid 7DLGT low borderline
KAF0914034.1 Alkaloid 7DLGT low borderline
KAF0914035.1 Alkaloid 7DLGT low borderline
KAF0914651.1 Alkaloid 7DLGT low borderline
KAF0914792.1 Alkaloid 7DLGT low borderline
KAF0914797.1 Alkaloid 7DLGT low borderline
KAF0915038.1 Alkaloid 7DLGT low borderline
KAF0915371.1 Alkaloid 7DLGT low borderline
KAF0915372.1 Alkaloid 7DLGT low borderline
KAF0915779.1 Alkaloid 7DLGT medium pass
KAF0915780.1 Alkaloid 7DLGT medium pass
KAF0915821.1 Alkaloid 7DLGT low borderline
KAF0915823.1 Alkaloid 7DLGT low borderline
KAF0916106.1 Alkaloid 7DLGT medium pass
KAF0916838.1 Alkaloid 7DLGT low borderline
KAF0916839.1 Alkaloid 7DLGT low borderline
KAF0917804.1 Alkaloid 7DLGT low borderline
KAF0919062.1 Alkaloid 7DLGT low borderline
KAF0919064.1 Alkaloid 7DLGT low borderline
KAF0919067.1 Alkaloid 7DLGT medium pass
KAF0919068.1 Alkaloid 7DLGT low borderline
KAF0919069.1 Alkaloid 7DLGT low borderline