PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
KAF0919071.1 Alkaloid 7DLGT medium pass
KAF0919242.1 Alkaloid 7DLGT low borderline
KAF0919260.1 Alkaloid 7DLGT low borderline
KAF0919671.1 Alkaloid 7DLGT low borderline
KAF0919672.1 Alkaloid 7DLGT low borderline
KAF0920414.1 Alkaloid 7DLGT low borderline
KAF0920415.1 Alkaloid 7DLGT low borderline
KAF0920416.1 Alkaloid 7DLGT low borderline
KAF0923046.1 Alkaloid 7DLGT high pass
KAF0923400.1 Alkaloid 7DLGT medium pass
KAF0923528.1 Alkaloid 7DLGT low borderline
KAF0923532.1 Alkaloid 7DLGT low borderline
KAF0923533.1 Alkaloid 7DLGT medium pass
KAF0923535.1 Alkaloid 7DLGT low borderline
KAF0924224.1 Alkaloid 7DLGT medium pass
KAF0924225.1 Alkaloid 7DLGT low borderline
KAF0925935.1 Alkaloid 7DLGT low borderline
KAF0925936.1 Alkaloid 7DLGT medium pass
KAF0925958.1 Alkaloid 7DLGT low borderline
KAF0926270.1 Alkaloid 7DLGT low borderline
KAF0927074.1 Alkaloid 7DLGT low borderline
KAF0927076.1 Alkaloid 7DLGT low borderline
KAF0927077.1 Alkaloid 7DLGT low borderline
KAF0927079.1 Alkaloid 7DLGT low borderline
KAF0927271.1 Alkaloid 7DLGT low borderline
KAF0927274.1 Alkaloid 7DLGT medium pass
KAF0927276.1 Alkaloid 7DLGT medium pass
KAF0927277.1 Alkaloid 7DLGT medium pass
KAF0928526.1 Alkaloid 7DLGT medium pass
KAF0929002.1 Alkaloid 7DLGT medium pass
KAF0929003.1 Alkaloid 7DLGT medium pass
KAF0929004.1 Alkaloid 7DLGT high pass
KAF0929255.1 Alkaloid 7DLGT medium pass
KAF0930722.1 Alkaloid 7DLGT medium pass
KAF0931746.1 Alkaloid 7DLGT medium pass
KAF0931832.1 Alkaloid 7DLGT medium pass
KAF0931833.1 Alkaloid 7DLGT medium pass
KAF0931835.1 Alkaloid 7DLGT low borderline
KAF0933078.1 Alkaloid 7DLGT medium pass
KAF0933079.1 Alkaloid 7DLGT medium pass
KAF0933080.1 Alkaloid 7DLGT medium pass
KAF0933473.1 Alkaloid 7DLGT low borderline
KAF0934087.1 Alkaloid 7DLGT low borderline
KAF0935105.1 Alkaloid 7DLGT medium pass
KAF0935106.1 Alkaloid 7DLGT medium pass
KAF0935107.1 Alkaloid 7DLGT medium pass
KAF0935108.1 Alkaloid 7DLGT medium pass
KAF0935534.1 Alkaloid 7DLGT low borderline
KAF0935941.1 Alkaloid 7DLGT medium pass
KAF0936068.1 Alkaloid 7DLGT low borderline