PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
KAF0921563.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921564.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0921755.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0923396.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0924372.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0928795.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0930214.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0930371.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0934171.1 Steroid BR6OX2/CYP85A2 low borderline
KAF0887854.1 Steroid CAS low borderline
KAF0887855.1 Steroid CAS medium pass
KAF0887856.1 Steroid CAS low borderline
KAF0887857.1 Steroid CAS medium pass
KAF0891649.1 Steroid CAS medium pass
KAF0892135.1 Steroid CAS medium pass
KAF0893593.1 Steroid CAS low borderline
KAF0894039.1 Steroid CAS medium pass
KAF0894040.1 Steroid CAS medium pass
KAF0894041.1 Steroid CAS medium pass
KAF0894043.1 Steroid CAS low borderline
KAF0894369.1 Steroid CAS medium pass
KAF0895937.1 Steroid CAS medium pass
KAF0895938.1 Steroid CAS medium pass
KAF0897278.1 Steroid CAS medium pass
KAF0897279.1 Steroid CAS medium pass
KAF0897285.1 Steroid CAS medium pass
KAF0897428.1 Steroid CAS low borderline
KAF0897588.1 Steroid CAS medium pass
KAF0897589.1 Steroid CAS medium pass
KAF0897642.1 Steroid CAS medium pass
KAF0901828.1 Steroid CAS medium pass
KAF0901829.1 Steroid CAS medium pass
KAF0904005.1 Steroid CAS medium pass
KAF0904006.1 Steroid CAS medium pass
KAF0904007.1 Steroid CAS medium pass
KAF0904008.1 Steroid CAS medium pass
KAF0904009.1 Steroid CAS medium pass
KAF0904010.1 Steroid CAS medium pass
KAF0904020.1 Steroid CAS medium pass
KAF0904025.1 Steroid CAS low borderline
KAF0906465.1 Steroid CAS medium pass
KAF0906466.1 Steroid CAS medium pass
KAF0909514.1 Steroid CAS low borderline
KAF0909515.1 Steroid CAS low borderline
KAF0910795.1 Steroid CAS medium pass
KAF0910796.1 Steroid CAS medium pass
KAF0910797.1 Steroid CAS medium pass
KAF0910798.1 Steroid CAS medium pass
KAF0910799.1 Steroid CAS medium pass
KAF0910904.1 Steroid CAS low borderline