PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

1789
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
KAF0911292.1 Steroid CAS medium pass
KAF0911631.1 Steroid CAS medium pass
KAF0911898.1 Steroid CAS low borderline
KAF0911900.1 Steroid CAS low borderline
KAF0911904.1 Steroid CAS low borderline
KAF0911911.1 Steroid CAS low borderline
KAF0913878.1 Steroid CAS medium pass
KAF0925107.1 Steroid CAS medium pass
KAF0925108.1 Steroid CAS medium pass
KAF0925109.1 Steroid CAS medium pass
KAF0931485.1 Steroid CAS low borderline
KAF0932495.1 Steroid CAS medium pass
KAF0933696.1 Steroid CAS medium pass
KAF0933697.1 Steroid CAS medium pass
KAF0933698.1 Steroid CAS medium pass
KAF0933699.1 Steroid CAS medium pass
KAF0933700.1 Steroid CAS medium pass
KAF0933701.1 Steroid CAS medium pass
KAF0933702.1 Steroid CAS medium pass
KAF0933703.1 Steroid CAS medium pass
KAF0933704.1 Steroid CAS medium pass
KAF0934172.1 Steroid CAS medium pass
KAF0934173.1 Steroid CAS medium pass
KAF0934174.1 Steroid CAS low borderline
KAF0935245.1 Steroid CAS medium pass
KAF0887994.1 Steroid CPD/CYP90A1 low borderline
KAF0890119.1 Steroid CPD/CYP90A1 low borderline
KAF0891483.1 Steroid CPD/CYP90A1 low borderline
KAF0896618.1 Steroid CPD/CYP90A1 low borderline
KAF0898316.1 Steroid CPD/CYP90A1 medium borderline
KAF0898855.1 Steroid CPD/CYP90A1 low borderline
KAF0905352.1 Steroid CPD/CYP90A1 low borderline
KAF0905353.1 Steroid CPD/CYP90A1 medium borderline
KAF0905354.1 Steroid CPD/CYP90A1 medium borderline
KAF0909120.1 Steroid CPD/CYP90A1 low borderline
KAF0909121.1 Steroid CPD/CYP90A1 low borderline
KAF0910081.1 Steroid CPD/CYP90A1 low borderline
KAF0912577.1 Steroid CPD/CYP90A1 low borderline
KAF0912578.1 Steroid CPD/CYP90A1 low borderline
KAF0915101.1 Steroid CPD/CYP90A1 low borderline
KAF0917959.1 Steroid CPD/CYP90A1 low borderline
KAF0917961.1 Steroid CPD/CYP90A1 low borderline
KAF0919677.1 Steroid CPD/CYP90A1 low borderline
KAF0919678.1 Steroid CPD/CYP90A1 low borderline
KAF0920567.1 Steroid CPD/CYP90A1 medium borderline
KAF0921707.1 Steroid CPD/CYP90A1 medium borderline
KAF0924548.1 Steroid CPD/CYP90A1 low borderline
KAF0927061.1 Steroid CPD/CYP90A1 medium borderline
KAF0928589.1 Steroid CPD/CYP90A1 medium borderline
KAF0928590.1 Steroid CPD/CYP90A1 medium borderline