PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0912532.1 Steroid CYP90D1 low borderline
KAF0915974.1 Steroid CYP90D1 medium borderline
KAF0915975.1 Steroid CYP90D1 low borderline
KAF0916542.1 Steroid CYP90D1 low borderline
KAF0916543.1 Steroid CYP90D1 low borderline
KAF0916544.1 Steroid CYP90D1 low borderline
KAF0916545.1 Steroid CYP90D1 low borderline
KAF0920283.1 Steroid CYP90D1 low borderline
KAF0920284.1 Steroid CYP90D1 low borderline
KAF0920442.1 Steroid CYP90D1 low borderline
KAF0921602.1 Steroid CYP90D1 low borderline
KAF0921753.1 Steroid CYP90D1 medium borderline
KAF0930583.1 Steroid CYP90D1 low borderline
KAF0918291.1 Steroid DET2 low borderline
KAF0918292.1 Steroid DET2 low borderline
KAF0918479.1 Steroid DET2 medium pass
KAF0893907.1 Steroid DWF1 medium pass
KAF0907702.1 Steroid DWF1 low borderline
KAF0887708.1 Steroid DWF4/CYP90B1 low borderline
KAF0887709.1 Steroid DWF4/CYP90B1 low borderline
KAF0889123.1 Steroid DWF4/CYP90B1 low borderline
KAF0890190.1 Steroid DWF4/CYP90B1 low borderline
KAF0890604.1 Steroid DWF4/CYP90B1 medium borderline
KAF0891665.1 Steroid DWF4/CYP90B1 low borderline
KAF0891929.1 Steroid DWF4/CYP90B1 low borderline
KAF0893331.1 Steroid DWF4/CYP90B1 low borderline
KAF0893332.1 Steroid DWF4/CYP90B1 low borderline
KAF0893333.1 Steroid DWF4/CYP90B1 low borderline
KAF0893496.1 Steroid DWF4/CYP90B1 low borderline
KAF0896506.1 Steroid DWF4/CYP90B1 low borderline
KAF0897159.1 Steroid DWF4/CYP90B1 low borderline
KAF0899307.1 Steroid DWF4/CYP90B1 low borderline
KAF0900653.1 Steroid DWF4/CYP90B1 low borderline
KAF0900654.1 Steroid DWF4/CYP90B1 low borderline
KAF0900655.1 Steroid DWF4/CYP90B1 low borderline
KAF0900656.1 Steroid DWF4/CYP90B1 low borderline
KAF0902008.1 Steroid DWF4/CYP90B1 low borderline
KAF0902282.1 Steroid DWF4/CYP90B1 low borderline
KAF0903461.1 Steroid DWF4/CYP90B1 medium borderline
KAF0903462.1 Steroid DWF4/CYP90B1 medium borderline
KAF0903463.1 Steroid DWF4/CYP90B1 low borderline
KAF0904947.1 Steroid DWF4/CYP90B1 low borderline
KAF0904949.1 Steroid DWF4/CYP90B1 low borderline
KAF0906916.1 Steroid DWF4/CYP90B1 low borderline
KAF0906920.1 Steroid DWF4/CYP90B1 low borderline
KAF0906922.1 Steroid DWF4/CYP90B1 low borderline
KAF0906924.1 Steroid DWF4/CYP90B1 low borderline
KAF0907551.1 Steroid DWF4/CYP90B1 low borderline
KAF0909279.1 Steroid DWF4/CYP90B1 low borderline
KAF0911960.1 Steroid DWF4/CYP90B1 low borderline