PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0911983.1 Steroid DWF4/CYP90B1 low borderline
KAF0911984.1 Steroid DWF4/CYP90B1 low borderline
KAF0912403.1 Steroid DWF4/CYP90B1 medium borderline
KAF0912870.1 Steroid DWF4/CYP90B1 low borderline
KAF0915076.1 Steroid DWF4/CYP90B1 low borderline
KAF0915320.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915321.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915322.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915323.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915324.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915325.1 Steroid DWF4/CYP90B1 medium borderline
KAF0915501.1 Steroid DWF4/CYP90B1 low borderline
KAF0915774.1 Steroid DWF4/CYP90B1 low borderline
KAF0916060.1 Steroid DWF4/CYP90B1 low borderline
KAF0918583.1 Steroid DWF4/CYP90B1 low borderline
KAF0918585.1 Steroid DWF4/CYP90B1 low borderline
KAF0919791.1 Steroid DWF4/CYP90B1 low borderline
KAF0919792.1 Steroid DWF4/CYP90B1 low borderline
KAF0919796.1 Steroid DWF4/CYP90B1 low borderline
KAF0919797.1 Steroid DWF4/CYP90B1 low borderline
KAF0919803.1 Steroid DWF4/CYP90B1 low borderline
KAF0919882.1 Steroid DWF4/CYP90B1 low borderline
KAF0920189.1 Steroid DWF4/CYP90B1 low borderline
KAF0920190.1 Steroid DWF4/CYP90B1 low borderline
KAF0920214.1 Steroid DWF4/CYP90B1 low borderline
KAF0920445.1 Steroid DWF4/CYP90B1 medium pass
KAF0921843.1 Steroid DWF4/CYP90B1 low borderline
KAF0922813.1 Steroid DWF4/CYP90B1 low borderline
KAF0924208.1 Steroid DWF4/CYP90B1 medium borderline
KAF0924831.1 Steroid DWF4/CYP90B1 low borderline
KAF0924833.1 Steroid DWF4/CYP90B1 low borderline
KAF0925358.1 Steroid DWF4/CYP90B1 low borderline
KAF0926393.1 Steroid DWF4/CYP90B1 low borderline
KAF0926757.1 Steroid DWF4/CYP90B1 low borderline
KAF0926758.1 Steroid DWF4/CYP90B1 low borderline
KAF0927481.1 Steroid DWF4/CYP90B1 low borderline
KAF0927918.1 Steroid DWF4/CYP90B1 low borderline
KAF0928775.1 Steroid DWF4/CYP90B1 low borderline
KAF0928776.1 Steroid DWF4/CYP90B1 low borderline
KAF0929272.1 Steroid DWF4/CYP90B1 low borderline
KAF0929313.1 Steroid DWF4/CYP90B1 low borderline
KAF0929419.1 Steroid DWF4/CYP90B1 low borderline
KAF0930555.1 Steroid DWF4/CYP90B1 low borderline
KAF0933901.1 Steroid DWF4/CYP90B1 low borderline
KAF0933913.1 Steroid DWF4/CYP90B1 low borderline
KAF0934599.1 Steroid DWF4/CYP90B1 low borderline
KAF0935098.1 Steroid DWF4/CYP90B1 medium borderline
KAF0935417.1 Steroid DWF4/CYP90B1 low borderline
KAF0935517.1 Steroid DWF4/CYP90B1 low borderline
KAF0935897.1 Steroid DWF5 medium borderline