PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0915106.1 Alkaloid CODM/T6ODM medium borderline
KAF0916129.1 Alkaloid CODM/T6ODM medium borderline
KAF0916130.1 Alkaloid CODM/T6ODM medium borderline
KAF0916301.1 Alkaloid CODM/T6ODM medium borderline
KAF0917934.1 Alkaloid CODM/T6ODM medium borderline
KAF0917974.1 Alkaloid CODM/T6ODM medium borderline
KAF0918038.1 Alkaloid CODM/T6ODM medium borderline
KAF0919930.1 Alkaloid CODM/T6ODM medium borderline
KAF0924659.1 Alkaloid CODM/T6ODM medium borderline
KAF0924857.1 Alkaloid CODM/T6ODM medium borderline
KAF0925939.1 Alkaloid CODM/T6ODM medium borderline
KAF0927514.1 Alkaloid CODM/T6ODM medium borderline
KAF0927753.1 Alkaloid CODM/T6ODM medium borderline
KAF0928300.1 Alkaloid CODM/T6ODM medium borderline
KAF0928709.1 Alkaloid CODM/T6ODM medium borderline
KAF0931294.1 Alkaloid CODM/T6ODM medium borderline
KAF0931772.1 Alkaloid CODM/T6ODM medium borderline
KAF0934762.1 Alkaloid CODM/T6ODM medium borderline
KAF0935478.1 Alkaloid CODM/T6ODM medium borderline
KAF0890279.1 Alkaloid COR medium pass
KAF0890280.1 Alkaloid COR medium pass
KAF0890281.1 Alkaloid COR medium pass
KAF0890282.1 Alkaloid COR medium pass
KAF0890284.1 Alkaloid COR medium pass
KAF0890285.1 Alkaloid COR medium pass
KAF0904449.1 Alkaloid COR medium pass
KAF0904450.1 Alkaloid COR medium pass
KAF0904451.1 Alkaloid COR medium pass
KAF0913426.1 Alkaloid COR medium pass
KAF0920231.1 Alkaloid COR low borderline
KAF0923933.1 Alkaloid COR medium pass
KAF0923934.1 Alkaloid COR medium pass
KAF0923935.1 Alkaloid COR medium pass
KAF0923936.1 Alkaloid COR medium pass
KAF0923937.1 Alkaloid COR medium pass
KAF0923938.1 Alkaloid COR medium pass
KAF0923939.1 Alkaloid COR medium pass
KAF0923940.1 Alkaloid COR medium pass
KAF0923941.1 Alkaloid COR medium pass
KAF0923942.1 Alkaloid COR medium pass
KAF0923943.1 Alkaloid COR medium pass
KAF0923944.1 Alkaloid COR medium pass
KAF0923945.1 Alkaloid COR medium pass
KAF0923946.1 Alkaloid COR medium pass
KAF0923947.1 Alkaloid COR medium pass
KAF0923948.1 Alkaloid COR medium pass
KAF0927720.1 Alkaloid COR medium pass
KAF0929136.1 Alkaloid COR medium pass
KAF0929137.1 Alkaloid COR medium pass
KAF0929139.1 Alkaloid COR medium pass