PlantSME Plant secondary metabolism enzyme database

Oryza granulata (oryza_granulata)

Imported from atlas release summary for Oryza granulata.

2184
Candidate Protein Records
1789
Pathway-Level Records
4061
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 564 19 BAHD (242) View species results
Alkaloid pathway 398 22 7DLGT (69) View species results
Phenylpropanoid pathway 308 13 POD (144) View species results
Flavonoid pathway 254 12 UFGT (158) View species results
Steroid pathway 150 12 SMT1/SMT2/SMT3 (58) View species results
Rosmarinic acid pathway 115 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1259 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 403 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KAF0929140.1 Alkaloid COR medium pass
KAF0929141.1 Alkaloid COR medium pass
KAF0931325.1 Alkaloid COR medium pass
KAF0935045.1 Alkaloid COR medium pass
KAF0890482.1 Alkaloid CYP719 medium borderline
KAF0890483.1 Alkaloid CYP719 medium borderline
KAF0890484.1 Alkaloid CYP719 medium borderline
KAF0890485.1 Alkaloid CYP719 medium borderline
KAF0890486.1 Alkaloid CYP719 medium borderline
KAF0890487.1 Alkaloid CYP719 medium borderline
KAF0901826.1 Alkaloid CYP719 medium borderline
KAF0902469.1 Alkaloid CYP719 low borderline
KAF0916789.1 Alkaloid CYP719 medium borderline
KAF0920187.1 Alkaloid CYP719 medium borderline
KAF0921755.1 Alkaloid CYP719 medium borderline
KAF0934171.1 Alkaloid CYP719 medium borderline
KAF0891585.1 Alkaloid CYP80B1 medium borderline
KAF0893928.1 Alkaloid CYP80B1 medium borderline
KAF0894409.1 Alkaloid CYP80B1 medium borderline
KAF0902392.1 Alkaloid CYP80B1 low borderline
KAF0909276.1 Alkaloid CYP80B1 medium borderline
KAF0928202.1 Alkaloid CYP80B1 medium borderline
KAF0935573.1 Alkaloid CYP80B1 medium borderline
KAF0936185.1 Alkaloid CYP80B1 low borderline
KAF0922719.1 Alkaloid CYP80F1 medium borderline
KAF0887709.1 Alkaloid G8O/G8H medium borderline
KAF0891664.1 Alkaloid G8O/G8H low borderline
KAF0892185.1 Alkaloid G8O/G8H low borderline
KAF0893283.1 Alkaloid G8O/G8H medium borderline
KAF0893496.1 Alkaloid G8O/G8H medium borderline
KAF0895340.1 Alkaloid G8O/G8H low borderline
KAF0897568.1 Alkaloid G8O/G8H medium borderline
KAF0898000.1 Alkaloid G8O/G8H medium pass
KAF0898001.1 Alkaloid G8O/G8H low borderline
KAF0898311.1 Alkaloid G8O/G8H low borderline
KAF0898358.1 Alkaloid G8O/G8H low borderline
KAF0899601.1 Alkaloid G8O/G8H medium pass
KAF0900387.1 Alkaloid G8O/G8H medium borderline
KAF0901808.1 Alkaloid G8O/G8H medium borderline
KAF0902282.1 Alkaloid G8O/G8H medium borderline
KAF0902366.1 Alkaloid G8O/G8H medium borderline
KAF0904465.1 Alkaloid G8O/G8H medium borderline
KAF0904466.1 Alkaloid G8O/G8H medium borderline
KAF0906462.1 Alkaloid G8O/G8H medium borderline
KAF0909506.1 Alkaloid G8O/G8H medium borderline
KAF0909517.1 Alkaloid G8O/G8H medium pass
KAF0909590.1 Alkaloid G8O/G8H medium pass
KAF0912983.1 Alkaloid G8O/G8H low borderline
KAF0915072.1 Alkaloid G8O/G8H low borderline
KAF0915073.1 Alkaloid G8O/G8H low borderline